|
Name : T1E_4489 (T1E_4489) Accession : YP_006535112.1 Strain : Pseudomonas putida DOT-T1E Genome accession: NC_018220 Putative virulence/resistance : Resistance Product : heavy metal translocating P-type ATPase Function : - COG functional category : - COG ID : - EC number : - Position : 4884370 - 4886622 bp Length : 2253 bp Strand : + Note : - DNA sequence : ATGAACCAGCCTGTCAGCCACGAACACAAGCATCCGCACGATCACGCTCATGGTGATGACGACCATGGCCATGCTGCCCA CGGCCACAGCTGCTGCGGCGCCAAAACCGCGCCGCCGCTGGTGCAACTGAGCGAAACGGCCAGTGCCCAGGCACAACTCA GTCGTTTCCGCATCGATGCCATGGACTGCCCCACCGAGCAGACCCTGATTCAGGACAAACTGAGCAAGCTGGCCGGTATC GAACAGCTGGAATTCAACCTGATCAACCGCGTGCTTGGCGTGCGCCATACCTTGGACGGCACCGCCGATATCGAGCGGGC TATCGACAGCCTGGGCATGAAGGCCGAGCCGATTGCCGCCCAGGACGACGGCAGCGCCAGCGTGCCACAACCGGCCAAGG CCCGCTGGTGGCCACTGGCATTGTCGGGCGTCGCCGCGATCGCCGCCGAAATCGTGCACTTTGCTGCACTGGCCCCTGAG TGGGTGGTAGCGGGACTGGCGCTTGCCGCGATCCTAGGTTGCGGCCTGGGTACCTACAAGAAGGGCTGGATTGCCCTGAA AAACCGTAACCTCAACATCAATGCGCTGATGAGTATCGCCGTGACGGGGGCCGTATTGATCGGCCAGTGGCCGGAAGCGG CTATGGTGATGGTGCTGTTCACCGTTGCCGAACTGATCGAAGCGCGCTCGCTGGACCGTGCGCGCAATGCCATCGGCGGG TTGATGCAGCTGACCCCGGACATGGCTACGGTGCAGCAGGCCGATGGCCAGTGGCGCGAGCTGGAAGTGCGTGAGGTGGC CATCGGCGCACTGGTGCGGGTGCGCCCCGGTGAGCGCATCGGCCTGGACGGTGAAGTGACCAGCGGGCAATCCAGCGTCG ATCAGGCGCCGATTACCGGCGAAAGCCTGCCTGTGGAGAAGGGGGTGGGCGACAAGCTGTTCGCTGGCACCATCAACCAG GCGGGGGCGCTGGAGTTTCGCGTCACCGCCGCTGCCGGGCAGTCGACCCTGGCGCGGATCATCAAGGCTGTGGAGGAAGC GCAGGGCGCGCGGGCGCCTACCCAACGCTTCGTCGACCGTTTCTCGCGTATCTACACCCCGGTGGTATTCGCCATTGCCC TGGCCGTGGCGCTGTTACCCCCGCTGTTCATGGCTGGCGCCTGGTTCGACTGGGTTTACCGCGCCTTGGTGCTGCTGGTG GTGGCCTGCCCCTGCGCGCTGGTGATCTCGACCCCGGTGACCATCGTCAGTGGCCTGGCCGCCGCTGCGCGCAAAGGCAT CCTGATCAAGGGTGGCGTGTACCTGGAGGGTGGCCGCCACCTGGATTTCCTGGCCCTGGACAAGACCGGCACCATCACCC ATGGCAAGCCGGTGCAGACCGACGCCAAGGTGCTGGCGCCGCTGTTCGAAGACCGTGCGCAAGCCTTGGCGGCCAGCCTG GGCGAGCGTTCGGACCACCCGGTGTCCCGCGCCATTGCCGAGTTCGGCAAGCAGCAAGGCCTGGCCTTGAGCGAGGTCAG TGACTTCGCCGCCCTGGCCGGGCGTGGCGTGCGTGGTGTCATCGCCGGTGAGGTCTACCACTTGGGCAACCACCGCCTGG TCGAGGAACTGGGGCTGTGTTCGCCAGCGCTGGAGGCCCAGCTTGATGCGCTGGAGCGCCAGGGCAAGACCGTGGTCCTG CTGCTCGACCGATCCGGCCCTCTGGCACTGTTCGCCGTGGCCGACACGGTCAAGGACAGCAGCCGTCAGGCGATCGCCGA ATTGCATCAACTGGGTATCAAGACTGTCATGCTGACCGGTGACAATCCGCATACTGCGCAGGCCATTGCCGCCGTGGTGG GGATCGACCGCGCCGAGGGCAACCTGTTGCCGGCCGACAAGCTGAAAACCATTGAGGCGTTGTACGCCCAAGGCCATCGG GTAGGCATGGTCGGTGACGGCATCAACGACGCCCCGGCGCTGGCCCGCGCCGAAATCGGTTTTGCCATGGCTGCTGCCGG CACCGACACCGCCATCGAGACGGCTGATGTGGCACTGATGGACGATGACTTGCGCAAAATCCCGGCCTTCGTCAGGCTGT CGCGCCAAAGTGCGGCGATCCTCATGCAGAACATCGTTCTGGCGTTGGGCATCAAGGCGATATTTCTGGCGATCACCTTT GCCGGCATGGCCACGATGTGGATGGCGGTGTTCGCTGATATGGGCGTGAGCTTGCTGGTGGTGTTCAACGGCTTGCGCCT TTTGCGCAAATAG Protein sequence : MNQPVSHEHKHPHDHAHGDDDHGHAAHGHSCCGAKTAPPLVQLSETASAQAQLSRFRIDAMDCPTEQTLIQDKLSKLAGI EQLEFNLINRVLGVRHTLDGTADIERAIDSLGMKAEPIAAQDDGSASVPQPAKARWWPLALSGVAAIAAEIVHFAALAPE WVVAGLALAAILGCGLGTYKKGWIALKNRNLNINALMSIAVTGAVLIGQWPEAAMVMVLFTVAELIEARSLDRARNAIGG LMQLTPDMATVQQADGQWRELEVREVAIGALVRVRPGERIGLDGEVTSGQSSVDQAPITGESLPVEKGVGDKLFAGTINQ AGALEFRVTAAAGQSTLARIIKAVEEAQGARAPTQRFVDRFSRIYTPVVFAIALAVALLPPLFMAGAWFDWVYRALVLLV VACPCALVISTPVTIVSGLAAAARKGILIKGGVYLEGGRHLDFLALDKTGTITHGKPVQTDAKVLAPLFEDRAQALAASL GERSDHPVSRAIAEFGKQQGLALSEVSDFAALAGRGVRGVIAGEVYHLGNHRLVEELGLCSPALEAQLDALERQGKTVVL LLDRSGPLALFAVADTVKDSSRQAIAELHQLGIKTVMLTGDNPHTAQAIAAVVGIDRAEGNLLPADKLKTIEALYAQGHR VGMVGDGINDAPALARAEIGFAMAAAGTDTAIETADVALMDDDLRKIPAFVRLSRQSAAILMQNIVLALGIKAIFLAITF AGMATMWMAVFADMGVSLLVVFNGLRLLRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF C97 | AAN62190.1 | putative metal-transporting P-type ATPase | Not tested | PAGI-2(C) | Protein | 0.0 | 67 |
| unnamed | BAB47609.1 | cadmium resistance protein B | Not tested | Type-III SCCmec | Protein | 1e-110 | 48 |
| cadA | BAC57487.1 | Probable cadmium-transporting ATPase (Cadmium efflux ATPase) | Not tested | Type-IIIinv SCCmec | Protein | 1e-110 | 48 |
| SE0075 | NP_763630.1 | cadmium resistance protein B | Not tested | SCCpbp4 | Protein | 1e-108 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| T1E_4489 | YP_006535112.1 | heavy metal translocating P-type ATPase | BAC0298 | Protein | 0.0 | 67 |
| T1E_4489 | YP_006535112.1 | heavy metal translocating P-type ATPase | BAC0455 | Protein | 1e-79 | 43 |
| T1E_4489 | YP_006535112.1 | heavy metal translocating P-type ATPase | BAC0092 | Protein | 9e-74 | 41 |
