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Name : T1E_4437 (T1E_4437) Accession : YP_006535060.1 Strain : Pseudomonas putida DOT-T1E Genome accession: NC_018220 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : - COG ID : - EC number : - Position : 4829065 - 4830738 bp Length : 1674 bp Strand : - Note : - DNA sequence : ATGCATACCCCCGACAATCCGGCACTCGACCTCAAGCGAGTGCTCCAGGCCCTGCTCGCTGACCAGCACCTGCACGCCAG CGATACCCTGCAAGTACTCGAACACGCCGCTGCCCACCCCGCTAGCCACCCGCTGGAACACATCGCCGCCTGCAGCCTGG AAAACCGCCAGCACCCTGGTCAGCCTCTGGACCTGGAGTACCTTTGCCAATGGCTGGCCGACAAGGTCGGCCAACCCTAC CTGCGCATCGACCCCATGCAACTCGACCTGCCCCAGGTCACCGGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCAT CCTCATCGTCGCGGCCGATGCCTCCAGCGTCACCGTCGCCAGCGCCCAGCCTTTCCAGGATGACTGGCAGGCCGACCTGG CCCGTAGCCTCGGCCGGTCGATCCGTCGCGTACTGGCCAGCCCGCAGCAGATCCGTGAGTCAGCGCAGTCGTTCCACCGC CTGGCCCAGTCGGTAAAAGGCGCGCAATACCAGCAGTCGGCCAGCCTGGGGGAACTTGAGCAATTGCTGGAGCTGGGCAA ACGCCAGGCCGAGGCCAGCGCAGACGACGCACACATTGTGCATATCGTCGACTGGCTGCTGCAGTACGCCATTGAGCAAC GCGCCAGCGATATCCACTTGGAACCGCGCCGCGAACAGGGCCAGCTGCGCTACCGCATCGATGGCCTGCTGCACACCGTC TATGCCTTCCCCGCCGGGGTCACCCTGGCCCTCGTCAGCCGCCTGAAACACCTGGGGCGCATGGACGTTGCCGAGAAACG CCGGCCGCAGGACGGCCGGTTGCAAAGCCGCCTGCCCGGTGGTGGCGAAGTGGAGCTGCGGCTTTCGACCCTGCCCACCC CGTTTGGCGAGAAACTGGTGCTGCGCCTGTTCGACCCGCACCAGTTGCAAGAGGGCTTCGACCGCCTTGGCCTGCACGGC CAGCAACTGGCCCAATGGCAGCGCCTGCTACGTCAGCGCCAAGGCATCATCCTGGTCACCGGCCCCACCGGTTCCGGCAA AACCAGCACGCTGTACACCAGCCTCAAACTGCTGGCCACCCCACAGGTCAACCTGTGCACCATCGAAGACCCGATCGAGC GCCTGGAGCCTGCCTTCAACCAGCTGCAGGTGCAGCCCGCGCTGGACCTGGGGTTTGCCAACGCGGTCAGGGCCATGCTG CGCCAAGATCCCGATATCATCATGATCGGTGAAATTCGCGACCGCGAAACCGCACTGGTGGCAGTTCAGGCAGCGCTGAC CGGGCACCTGGTACTGTCGACCCTGCATACCAACGACGCCTGTGCAGCAATTACCCGCTTGCAAGAGCTGGGTGTGGCCG ACTACCTGATCAAGGCGACGCTTATCGGGGTGATGGCCCAGCGCCTGGTGCGAACCGTCTGCACCGACTGCCAGGCAGGT TCATCAGCCACCTGCCGAGCCTGCCGCGGCACCGGTTTTCAGGGGCGCACAGGATTATTCGAACTGCTCGAGCCCAGCGA CACCTTGCGTGCATTGATCGGCCCTCATGCCGACCTGACCCGATTGCGGCAACAGGCACTGGCCGATGGCCTGGTTGACC TGCGCCATTGCGGCGAGGCCAAAGTGGCCGCTGGGCAGACCCGTGCCGAGGAAGTGCTGCGCGTCTGCAACTGA Protein sequence : MHTPDNPALDLKRVLQALLADQHLHASDTLQVLEHAAAHPASHPLEHIAACSLENRQHPGQPLDLEYLCQWLADKVGQPY LRIDPMQLDLPQVTGLISPAFAQRHGILIVAADASSVTVASAQPFQDDWQADLARSLGRSIRRVLASPQQIRESAQSFHR LAQSVKGAQYQQSASLGELEQLLELGKRQAEASADDAHIVHIVDWLLQYAIEQRASDIHLEPRREQGQLRYRIDGLLHTV YAFPAGVTLALVSRLKHLGRMDVAEKRRPQDGRLQSRLPGGGEVELRLSTLPTPFGEKLVLRLFDPHQLQEGFDRLGLHG QQLAQWQRLLRQRQGIILVTGPTGSGKTSTLYTSLKLLATPQVNLCTIEDPIERLEPAFNQLQVQPALDLGFANAVRAML RQDPDIIMIGEIRDRETALVAVQAALTGHLVLSTLHTNDACAAITRLQELGVADYLIKATLIGVMAQRLVRTVCTDCQAG SSATCRACRGTGFQGRTGLFELLEPSDTLRALIGPHADLTRLRQQALADGLVDLRHCGEAKVAAGQTRAEEVLRVCN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 9e-59 | 47 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 7e-59 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| T1E_4437 | YP_006535060.1 | type II secretion system protein E | VFG2048 | Protein | 1e-58 | 47 |
