Gene Information

Name : T1E_4236 (T1E_4236)
Accession : YP_006534859.1
Strain : Pseudomonas putida DOT-T1E
Genome accession: NC_018220
Putative virulence/resistance : Unknown
Product : phage transcriptional regulator, AlpA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4612164 - 4612379 bp
Length : 216 bp
Strand : -
Note : -

DNA sequence :
ATGCAAGCAACCACCGCTACCCCTCTGCCCACCGACCGCCACATCATGCGCCGCGATGAAGTGGAGCAGAAAACCGGCTT
CAAGCGCTCGCACATCTACAACCTGATGAAAGCCGGCCAGTTCCCACAATGCCGACGCATCGGCACACGCGCCGTTGGCT
GGGATTCACTGGAGATTGAACAGTGGGTCCAGGACCGACTGTCCACGGGGGACTAA

Protein sequence :
MQATTATPLPTDRHIMRRDEVEQKTGFKRSHIYNLMKAGQFPQCRRIGTRAVGWDSLEIEQWVQDRLSTGD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C109 AAN62202.1 phage-related protein Not tested PAGI-2(C) Protein 1e-17 62
ORF SG104 AAN62325.1 phage-related protein Not tested PAGI-3(SG) Protein 6e-17 60
unnamed CAA21398.1 - Not tested HPI Protein 8e-10 48
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 5e-10 48
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 4e-06 42