Gene Information

Name : T1E_4229 (T1E_4229)
Accession : YP_006534852.1
Strain : Pseudomonas putida DOT-T1E
Genome accession: NC_018220
Putative virulence/resistance : Unknown
Product : single-strand DNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4606118 - 4606546 bp
Length : 429 bp
Strand : -
Note : -

DNA sequence :
ATGAGTACTTTGTTTGTTGGTGAAGGCAACATCGGCAGCGTTCCGGAGTATCAGGAGTTCAACACCAACCCGGATGAGCC
GCGGCGCCTGCTGCGGCTGAATGTCTACTTCGACAACCCGGTACCACGGGAAGGCGGCTACGAAGATCGCGGCGGCTACT
GGGCGCCCGTCGAGCTCTGGAACCGCGACGCCGAACACTGGGCCACGCTGTACCAGAAAGGCATGCGCGTCCTGGTCGAG
GGGCGCACGGTCAAGGAGGAATGGGAGGACAGCGAGGACAACGCGCGCGTGACGTTCAAGGTGGAGGCGCGGCGCATCGG
TATTCTGCCGCACCGCCTGGCCTCGGTGACCATGCGCGAGAAAGCCAGCGACAACGCCAGCTCATCGCGCAAGGGGGGAG
GCAAGAAAGCGCCACGCAAGTCCGGGTAA

Protein sequence :
MSTLFVGEGNIGSVPEYQEFNTNPDEPRRLLRLNVYFDNPVPREGGYEDRGGYWAPVELWNRDAEHWATLYQKGMRVLVE
GRTVKEEWEDSEDNARVTFKVEARRIGILPHRLASVTMREKASDNASSSRKGGGKKAPRKSG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb AAN62318.1 putative single-stranded DNA binding protein Not tested PAGI-3(SG) Protein 1e-45 70
ssb AAN62195.1 putative single-stranded DNA binding protein Not tested PAGI-2(C) Protein 7e-39 58
ssb AAP84220.1 single strand DNA binding protein Not tested PAPI-1 Protein 7e-26 56
ssb CAI36053.1 single-stranded DNA-binding protein Not tested PPHGI-1 Protein 4e-30 54
unnamed ABR13438.1 single-stranded DNA-binding protein 2 Not tested PAGI-5 Protein 1e-26 51