Gene Information

Name : T1E_0418 (T1E_0418)
Accession : YP_006531068.1
Strain : Pseudomonas putida DOT-T1E
Genome accession: NC_018220
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 474674 - 476011 bp
Length : 1338 bp
Strand : +
Note : -

DNA sequence :
ATGAGTTCACGCAATCCCGTTCTCTGGCCCGAAGGCCTGTTCGTCAAACCACAGCATTTCCAGCAGGCGACCAGGGCCAG
CGAAGCAGCCCTGCACCAGCGCCTCGCCAGCCTCAACGCAGCCTTCTACGGCTTCAGCGAACTTCAGTTGAGCGACGAAT
ACCTGAGCCTGGGCAAAGTCGCCATCACCCGGGCGCGCGGTGTGATGCCGGACGGCACGGTGTTCGACATTCCCGCCGAC
CTGCCGCCACCGCCGCCGCTGGAAATCGGCGACGACGCGTGCAAAGACAGTGAGGTGTATCTGTGCCTGCCGCTGCGTAC
CGATGGCGGCCGCGAAGTGAGCTGGCCCGACAATGCAGCCAATTTCCGCTATACCGCCCAGGCACAGGAAATCAAGGATA
CCCACACCGCTGACGGTGACCTGGTGCAGGTAGACCTTGCGGTGCCCAACCTGCAGCTCAAACGCAAGACCGAAGACAGC
AGCGCCTACACCCGCCTGGCCCTGGCACGTATTCTGGAACGGCGCCCCGACGGCAGCCTGCAACTGGACGAAGCGTTCTA
CCCCACCAGCGTTTCGGTGCGGGCGGTGCCAGCGCTGCAGCGGTTTCTTGAAGAAATCACCCATACCTTGCGCGAGCGGG
CGCGCGGCCTCGCCACGCGGATTGGTGCCTCGGGCCAGTCCGGGATCGCCGACATTCGCGACTTCAACCTGCTGCAGGCC
ATGAACCGTTGGTGGCCATGCTTCCAGCATCTGGCCAGGCAAGCGCAAACGCACCCCGAGCAGCTGTACCTGTGCATGAG
CCAGGCCTGCGGCGAATTCGTCACCTTCACCGACCAGAACAGGCTGCCGCAGGAGTACCCCGCCTATCACCACACCGCGC
TGCGCACCTCTTTCAAACCACTGGAAGACACCTTGCGTCGGTCTCTGAGCACCGTCTTGCGGCCACGCGCTGTTTCACTA
CCGCTGGAGAGCGAACAATTCGGCGTGATGACGACCACGCTGGAAGACCGCCGGCTGATCGACGAAGCCGACTTCATCCT
CGCCGTGCGCGCCAGCATGCCACCACAGGCGTTGCGCCAGATGTTCATCCAGAAAGCCAAGATCACCTCGCTTGAGTCAC
TGAATGACCTGGTGCCGCTGCAATTGCCGGGCATCCCTTTGTTGCCATTACCCGTGGCGCCCCGCGACCTGCCCTTCCAT
GCGGGCTTCAGCTACTTCGAGCTGGACCGACGAGACCCGGCCTGGGCGTGCATGAGCAAGGCGAATGGCTTCGGCATCCA
CATTGCGGGCGACTTCCCAGGGCTTGAACTGCAGTTCTGGGCGATCAGGAGTGAGTGA

Protein sequence :
MSSRNPVLWPEGLFVKPQHFQQATRASEAALHQRLASLNAAFYGFSELQLSDEYLSLGKVAITRARGVMPDGTVFDIPAD
LPPPPPLEIGDDACKDSEVYLCLPLRTDGGREVSWPDNAANFRYTAQAQEIKDTHTADGDLVQVDLAVPNLQLKRKTEDS
SAYTRLALARILERRPDGSLQLDEAFYPTSVSVRAVPALQRFLEEITHTLRERARGLATRIGASGQSGIADIRDFNLLQA
MNRWWPCFQHLARQAQTHPEQLYLCMSQACGEFVTFTDQNRLPQEYPAYHHTALRTSFKPLEDTLRRSLSTVLRPRAVSL
PLESEQFGVMTTTLEDRRLIDEADFILAVRASMPPQALRQMFIQKAKITSLESLNDLVPLQLPGIPLLPLPVAPRDLPFH
AGFSYFELDRRDPAWACMSKANGFGIHIAGDFPGLELQFWAIRSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec25 AAQ96719.1 Aec25 Not tested AGI-1 Protein 7e-66 41
aec25 YP_851420.1 hypothetical protein Not tested PAI II APEC-O1 Protein 9e-66 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
T1E_0418 YP_006531068.1 hypothetical protein VFG2082 Protein 6e-100 49
T1E_0418 YP_006531068.1 hypothetical protein VFG2065 Protein 9e-77 45