Gene Information

Name : T1E_4219 (T1E_4219)
Accession : YP_006534842.1
Strain : Pseudomonas putida DOT-T1E
Genome accession: NC_018220
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4598260 - 4598922 bp
Length : 663 bp
Strand : -
Note : -

DNA sequence :
GTGGCGTGGACCGCGCCAAAACTGGTCGACTCGGCCCCGCAGTTCAGCGAACAGACACCGCTGGAATGGCAGGCATCCGA
TGCGACTCGGGCCAAGGCCTGGGGGCTGACGGAGGATGAGTGGGTTAAGTTCGAGCACCTGCAGGCTGGGCCCCGCCACT
ATTGGTCGCCGCAGCTCGACCCACTCACCACCCTCGGGGTGGAAGCCGACTCGGACCAGGAACGGCAACGCTACGCCGAG
CTGCAGGTCCGTCTCGAGGCCAAGCGCGCCGAGCGCGAACTGGCCTACCAGAAGGCCTACACCTCCGCCTGGGCGCGGCT
GTTCCCGGAAATGCTGCCCGTGCAGGGCATGGCCGATGATCCAGCAGCCACCCCTGCTAGCCGCTTTGCCCTGTTTGTGG
AAGAACGCTGCCCGCGCTGCGTCATCAACACTCAGCAATGGCTGCATGGTGGCGCGCGCCTCGATGTGTACTTGGTCGGC
AGCCAGGGTGACGATGGGCGTCTCCGCCAGTGGGCACAGGGCGCGGGCATTACCCCCACCCAGATCAGCAGTGGCCAAGT
CACTCTCAACCATGACCGTGGCCGCTGGTTCGCTCTGGGCGCCAGCCGCCCCTTACCGGCGCGCTACCAGCAGATGGACG
GCAAATGGCAGCGCATCGACTGA

Protein sequence :
MAWTAPKLVDSAPQFSEQTPLEWQASDATRAKAWGLTEDEWVKFEHLQAGPRHYWSPQLDPLTTLGVEADSDQERQRYAE
LQVRLEAKRAERELAYQKAYTSAWARLFPEMLPVQGMADDPAATPASRFALFVEERCPRCVINTQQWLHGGARLDVYLVG
SQGDDGRLRQWAQGAGITPTQISSGQVTLNHDRGRWFALGASRPLPARYQQMDGKWQRID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG71 AAN62293.1 hypothetical protein Not tested PAGI-3(SG) Protein 1e-38 49
ORF C68 AAN62162.1 hypothetical protein Not tested PAGI-2(C) Protein 6e-41 46
pph69 CAI36110.1 hypothetical protein Not tested PPHGI-1 Protein 2e-43 45
EXA51 ABD94660.1 conserved hypothetical protein Not tested ExoU island A Protein 9e-42 44
RL051 AAP84177.1 conserved hypothetical protein Not tested PAPI-1 Protein 9e-42 44
YE3495 YP_001007654.1 hypothetical protein Not tested YAPI Protein 6e-33 44
unnamed ABR13379.1 hypothetical protein Not tested PAGI-5 Protein 1e-41 43
PMI2592 YP_002152311.1 hypothetical protein Not tested Not named Protein 6e-27 42
STY4558 NP_458644.1 putative exported protein Not tested SPI-7 Protein 2e-31 41
t4256 NP_807854.1 hypothetical protein Not tested SPI-7 Protein 2e-31 41