|
Name : T1E_4187 (T1E_4187) Accession : YP_006534810.1 Strain : Pseudomonas putida DOT-T1E Genome accession: NC_018220 Putative virulence/resistance : Unknown Product : relaxase Function : - COG functional category : - COG ID : - EC number : - Position : 4570512 - 4572224 bp Length : 1713 bp Strand : - Note : - DNA sequence : ATGAAACGCTGGTGGTTCAAACCGCAAAAAGGCCTTCCCGAAGAGTCCACCCCCGCCGCCGTGGGCTTTCATCAACCACT GTCGGCGGAATCACTGCTCGCTGCCAGCCATCGAAAAAAGCTGCTTGCTCGCATCTGGCAGTACACGGCCCTCTCCCCGC CACAGTTCGAACAACTCTACCTCGAACCGATTCGTCGCTACGCCACCTATGTACAGCAACTACCGGCCAGTGAGAGCCAT CACCATGCCTACCCAGGTGGCATGCTCGACCACGGCTTGGAGCTGGTGGCATGCAGCCTGAAGTTGCGCCAGTCCTACCT GCTCCCCGGTGGTGCCGCTCCGGAAGACCAGGCTGCGCAGGCTGATGCCTGGAGCGCCGCCATTGCCTATGGCGCCCTGC TCCATGACGTGGGTAAAATCGCCGTCGATCTCCAGGTGGAGTACCAGAATGGTGACCGCTGGCACCCCTGGCACGGCCCT TTGAATCAGCCCTACCGCTTCCGCTACGTCCCCGACCGGGATTACCAACTGCACGGTGCCGCCGCTGGGCTGCTGTATAC GCAGATCTTGACGCCCACGCTGCTTGACTGGCTCAGCAGCTACCCAGAATTGTGGAGACAATTGCTGTCCTTGCTGGCCG ACCACTACGAGCAGGCCGGCACACTCGGGGAGTTGGTGCTGCAAGCAGACCGGGTATCCACGGCACAGAACATTGGGGCC AACCCCACCAAAGCACTGCAGGCACCTAAACATTCGCTGCAGCATCACCTGCTCATGGGGCTACGCCACCTGGTCAAAAA CGAGTTCAAGCTCAACCAGCCCGGTGCTGCCGGCTGGCTCACTGTTGACCACCTGTGGTTGGTCAGCAAAACCGCGACCG ACAGGCTGCGTGCCTACCTGTTGGCCCAATCGGTGGACGGTATTCCCTCCTCCAACATCGCCATGTTCGATGAACTGCAA TCACATGGATTGGTGGATGAGACAGATAAAGGGAAAGCGGTGTGGAGCGCCGCCGTCACAGACGGGGACTGGCAGCATCG CTTTACCTTTCTCCGCCTGAAACCGAGCCTGATTTGGGCCGATGAACCTCGGCCAGACTGCTTCAACGGAACGATTGAGT CGATGATGGGCGATTCCCTGCCACCTCATGAAGCCCGCGAGTCAGCCCCAGATCGGCCGCACGTAGCCCCGAAACCAAAA CAGCACGACCCCGAGCTTTTGAATCAGGATTTCGACTACCTCGACGATTTGATGGAAATGTTGCAAGTGCCAGGCGAGCT CGAAACTGGATCAAGCACGGGAAGCCTGCAATCAACCGCTGCGCCACCTCAGAATTCCGTGGGCCTTGCCTTTCTCGAGT GGCTGCGCGACGGAATCCACACACATCGCTTACTGGTCAACGACAGCAAAGCAAAGGTCCACACCGTGGATGGCACTTTT TTCCTGGTCACTCCGGGCATTTTCCAGCGTTACGCAGCCGAGCATCTAGAGCAGCCTGACGGCGCGGCTCAGAAAGAACC TTGGCGACGTATTCAACGCGAATTTGAAAAGCTGGATGCTCATCTGAGAAAGCCCAATAGCCAGAACATTTGGACTTGCA CTGTACGAGGCCCGCGGAAAACCACATCCCTTAATGGCTACATCCTGCAAAATGTCAATCTCGTTGGTCTGACGCCACCT CCAGACAACCCCTTCCTAAAGTTACAGTTTTGA Protein sequence : MKRWWFKPQKGLPEESTPAAVGFHQPLSAESLLAASHRKKLLARIWQYTALSPPQFEQLYLEPIRRYATYVQQLPASESH HHAYPGGMLDHGLELVACSLKLRQSYLLPGGAAPEDQAAQADAWSAAIAYGALLHDVGKIAVDLQVEYQNGDRWHPWHGP LNQPYRFRYVPDRDYQLHGAAAGLLYTQILTPTLLDWLSSYPELWRQLLSLLADHYEQAGTLGELVLQADRVSTAQNIGA NPTKALQAPKHSLQHHLLMGLRHLVKNEFKLNQPGAAGWLTVDHLWLVSKTATDRLRAYLLAQSVDGIPSSNIAMFDELQ SHGLVDETDKGKAVWSAAVTDGDWQHRFTFLRLKPSLIWADEPRPDCFNGTIESMMGDSLPPHEARESAPDRPHVAPKPK QHDPELLNQDFDYLDDLMEMLQVPGELETGSSTGSLQSTAAPPQNSVGLAFLEWLRDGIHTHRLLVNDSKAKVHTVDGTF FLVTPGIFQRYAAEHLEQPDGAAQKEPWRRIQREFEKLDAHLRKPNSQNIWTCTVRGPRKTTSLNGYILQNVNLVGLTPP PDNPFLKLQF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF C36 | AAN62129.1 | conserved hypothetical protein | Not tested | PAGI-2(C) | Protein | 1e-125 | 52 |
| ORF SG44 | AAN62266.1 | conserved hypothetical protein | Not tested | PAGI-3(SG) | Protein | 3e-131 | 51 |
| unnamed | ABR13343.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 7e-121 | 47 |
| RL003 | AAP84130.1 | pathogenesis-related protein | Not tested | PAPI-1 | Protein | 2e-119 | 46 |
| pph99 | CAI36140.1 | predicted HD-superfamily hydrolase | Not tested | PPHGI-1 | Protein | 5e-110 | 45 |
