Gene Information

Name : T1E_0411 (T1E_0411)
Accession : YP_006531061.1
Strain : Pseudomonas putida DOT-T1E
Genome accession: NC_018220
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 468090 - 468593 bp
Length : 504 bp
Strand : +
Note : -

DNA sequence : 
ATGTCTAAAAATACGGGATCCGTTGCGCCGAAAGAACGCGTCAATATCAAGTATGTCCCCGCTACCAGCGATGAGCAGGC
TGAGGTGGAGCTGCCGCACAAGATGCTGGTGCTGGGCGACTTCGGCCTGGATGACAACCGTGCGCTTGAGGACCGTCAGG
TCATGCGCATCGATAAACATACATTCAACAGCGTGTTGAACGACGCCAACGTAAGCCTGGACGTGACGGTACCGTCCAGG
CTTGGCACCGCCCCGGATACCGAGCTGGCCGTCCGCCTGCAGTTCAGGTCCATCAACGATTTCGGGCCGGACCGGATCGC
GCGCCAGGTGCCCGAGCTGAACAAGCTGCTGGCGCTGCGCGAAGCACTGGTCGCCCTGAAAGGCCCGCTGGGTAACGTCC
CGGCCTTCCGCAAGCAATTGCAGCACCTGCTTAACAACGAGCAGGCGCGTAAGCAGCTCGCCCAAGAACTGGACCTGGTG
CTCGAGGCGCCAGAACAAGATTGA

Protein sequence : 
MSKNTGSVAPKERVNIKYVPATSDEQAEVELPHKMLVLGDFGLDDNRALEDRQVMRIDKHTFNSVLNDANVSLDVTVPSR
LGTAPDTELAVRLQFRSINDFGPDRIARQVPELNKLLALREALVALKGPLGNVPAFRKQLQHLLNNEQARKQLAQELDLV
LEAPEQD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HH0248 NP_859779.1 hypothetical protein Not tested HHGI1 Protein 3e-33 48
aec17 YP_851427.1 hypothetical protein Not tested PAI II APEC-O1 Protein 6e-36 47
aec17 AAQ96711.1 Aec17 Not tested AGI-1 Protein 4e-36 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
T1E_0411 YP_006531061.1 hypothetical protein VFG2092 Protein 5e-43 56
T1E_0411 YP_006531061.1 hypothetical protein VFG2474 Protein 6e-34 50