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Name : adiA (T1E_4126) Accession : YP_006534749.1 Strain : Pseudomonas putida DOT-T1E Genome accession: NC_018220 Putative virulence/resistance : Virulence Product : lysine decarboxylase Function : - COG functional category : - COG ID : - EC number : - Position : 4503689 - 4505938 bp Length : 2250 bp Strand : + Note : - DNA sequence : ATGTACAAGGACCTCAAGTTCCCGATCCTCATCGTCCACCGCGCCATCAAGGCCGACAGTGTTGCCGGCGAGCGCGTGCG CGGCATCGCCGAGGAATTGCGCCAGGATGGCTTTGCCATTCTCGCCGCAGCCGACCACGCCGAAGCACGCCTGGTCGCCG CCACTCACCACGGCCTGGCCTGCATGCTCATCGCGGCCGAAGGCGCTGGCGAGAACACCCATTTACTGCAGAACATGGCC GAGCTGATCCGCCTGGCCCGTCTGCGCGCACCCAACCTGCCGATCTTCGCCCTGGGCGAGCAGGTGACCCTGGAAAATGC TCCCGCCGAAGCCATGAGTGAGCTCAACCAGCTGCGTGGCATCCTTTACCTGTTCGAAGACACCGTGCCGTTTCTCGCCC GCCAGGTGGCGCGTGCTGCACACACCTACCTCGACGGCCTGCTGCCGCCGTTCTTCAAGGCGCTGGTGCAGCACACTGCG CAGTCCAACTACTCCTGGCACACCCCGGGCCATGGTGGCGGTGTGGCCTATCATAAAAGCCCGGTAGGCCAAGCCTTTCA CCAGTTCTTCGGGGAAAACACCCTGCGCTCGGACCTGTCCGTTTCCGTGCCGGAGCTGGGTTCGCTGCTCGACCACACAG GCCCGCTGGCCGAAGCCGAGGCCAGGGCGGCGCGCAACTTCGGCGCCGACCACACCTTCTTCGTCATCAACGGTACCTCC ACGGCCAACAAGATCGTCTGGCACGCCATGGTCGGTCGTGACGACCTGGTGCTGGTGGACCGCAACTGCCACAAGTCGGT GGTGCACGCGATCATCATGACGGGTGCCATCCCGCTGTACCTGTGCCCGGAGCGCAACGAACTGGGCATCATCGGCCCGA TCCCGCTCAGCGAGTTCAGCCCCGAGGCGATCGCCGCGAAGATTCAGGCCAACCCCCTTGCCCGTGATCGTGGGCAGCGT ATCAAGCTGGCGGTAGTGACCAACTCCACCTACGACGGGCTGTGTTACCACGCTGGGCTGATCAAGCAGGCCCTGGGTGC CAGTGTCGAGGTGCTGCACTTCGACGAGGCCTGGTTTGCCTATGCCGCGTTCCACGACTTTTTCACCGGGCGCTACGCCA TGGGCACCGCCTGCGCGGCAGACAGCCCGCTGGTGTTCAGTACCCATTCCACCCACAAGCTGCTCGCGGCGTTCAGCCAG GCTTCGATGATTCATGTGCAGGACGGGGCCAGGCGGCAGCTGGACCGGGACCGTTTCAACGAAGCGTTCATGATGCACAT CTCTACCTCGCCGCAGTACAGCATTCTCGCCTCGCTGGATGTGGCTTCGGCCATGATGGAAGGGCCGGCCGGGCGCTCGC TGCTGCAGGAGATGTTCGACGAGGCGTTGAGTTTTCGTCGTGCCCTGGCCAACCTGCGTGAGCACATTGCCGCAGAGGAC TGGTGGTTCAGCATCTGGCAGCCGCCCAGTGCCGAGGGCATCGCCCGTCTGGCCGCGCAGGACTGGTTGTTGCAGCCGGG GGCGCAATGGCATGGTTTTGGTGAAGTGGCGGCCGACTATGTGCTGCTCGACCCGCTGAAAGTGACTTTGGTGATGCCGG GCCTGAGCGCTGATGGTGTACTGGGCGCGCACGGCATCCCGGCGGCAGTCGTCAGCAAGTTTCTCTGGGAGCGCGGGCTG GTGGTGGAAAAAACCGGCCTGTACAGCTTTCTGGTGCTGTTTTCCATGGGCATCACCAAGGGCAAGTGGAGCACCTTGCT CACCGAACTGCTGGAGTTCAAGCGCCACTATGACGGCAACACCCCGCTCAGCAATTGCCTGCCGAGTGTTGGGGCTGCCG ACGCCCTCCGCTACCAGGGCATAGGCCTGCGCGACCTGTGCGACCAGTTACATGACTGCTACCGCGTCAATGCCACGGCC AAGCAGCTGAAGCGGCTGTTCACTCGTTTGCCGGAGGTGGCCGTAAGCCCGGCCCAGGCCTATGACAAGATGGTGCGTGG CGAGGTGGAGGCGGTACCGATCGAGGCGCTGCTGGGCCGTGTGGCGGCGGTGATGCTGGTGCCGTACCCGCCTGGCATCC CGTTGATCATGCCGGGTGAGCGGTTCACCGAGGCGACCCGCTCGATCCTGGACTACCTGGCATTCGCCCGAGCATTCAAC CAGGGCTTTCCCGGGTTTGTCGCCGATGTGCACGGCCTGCAGCACGAAGGGGGCCGCTACACGGTGGATTGCATCACGGA ATGCGCGTGA Protein sequence : MYKDLKFPILIVHRAIKADSVAGERVRGIAEELRQDGFAILAAADHAEARLVAATHHGLACMLIAAEGAGENTHLLQNMA ELIRLARLRAPNLPIFALGEQVTLENAPAEAMSELNQLRGILYLFEDTVPFLARQVARAAHTYLDGLLPPFFKALVQHTA QSNYSWHTPGHGGGVAYHKSPVGQAFHQFFGENTLRSDLSVSVPELGSLLDHTGPLAEAEARAARNFGADHTFFVINGTS TANKIVWHAMVGRDDLVLVDRNCHKSVVHAIIMTGAIPLYLCPERNELGIIGPIPLSEFSPEAIAAKIQANPLARDRGQR IKLAVVTNSTYDGLCYHAGLIKQALGASVEVLHFDEAWFAYAAFHDFFTGRYAMGTACAADSPLVFSTHSTHKLLAAFSQ ASMIHVQDGARRQLDRDRFNEAFMMHISTSPQYSILASLDVASAMMEGPAGRSLLQEMFDEALSFRRALANLREHIAAED WWFSIWQPPSAEGIARLAAQDWLLQPGAQWHGFGEVAADYVLLDPLKVTLVMPGLSADGVLGAHGIPAAVVSKFLWERGL VVEKTGLYSFLVLFSMGITKGKWSTLLTELLEFKRHYDGNTPLSNCLPSVGAADALRYQGIGLRDLCDQLHDCYRVNATA KQLKRLFTRLPEVAVSPAQAYDKMVRGEVEAVPIEALLGRVAAVMLVPYPPGIPLIMPGERFTEATRSILDYLAFARAFN QGFPGFVADVHGLQHEGGRYTVDCITECA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66195.1 | putative cadaverin decarboxylase | Virulence | PAI III 536 | Protein | 3e-127 | 42 |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 4e-125 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| adiA | YP_006534749.1 | lysine decarboxylase | VFG1670 | Protein | 2e-127 | 42 |
