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Name : yejF (T1E_4115) Accession : YP_006534738.1 Strain : Pseudomonas putida DOT-T1E Genome accession: NC_018220 Putative virulence/resistance : Unknown Product : peptide ABC transporter, ATP-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 4491347 - 4492954 bp Length : 1608 bp Strand : - Note : - DNA sequence : ATGAGTGAACAGAACCTGATCGAAGTGCGGGACCTGGCCGTGGAGTTCGTGACCGGGGACCAGGTCAACCGGGTGGTGGA CGGCGTCAGCTTCGATATTCGCAAAGGCGAGACACTGGCCCTGGTGGGCGAAAGTGGCTCGGGCAAATCGGTCACCGCGC ACTCGATCCTGCGCCTGCTGCCCTATCCCCTGGCCCGGCACCCCAGCGGCAGCATTCGCTACGAAGGCAAGGACCTGCTG CAGCAGAGCGAGAAGACCCTGCAGCGCATTCGCGGCAACCGCATTGCGATGATCTTCCAGGAGCCGATGACCTCGCTCAA CCCGCTGCATTGCATCGAAAAGCAGATCAACGAAATCCTCCTGCTGCACAAGGGCCTGACGGGCAAGGAAGCGACTGCGC GCACCCTGGAGTTGCTGGATATGGTCGGCATTCCAGAGCCGCGCAAGCGCCTCAAGGCCCTGCCCCACGAATTGTCGGGC GGCCAGCGCCAGCGGGTAATGATCGCCATGGCGCTGGCCAACGAGCCCGAGCTGCTGATTGCCGACGAGCCGACCACGGC GCTGGATGTGACCGTGCAGCTGAAGATCCTCGAGCTGCTCAAGGAATTGCAGGCGCGTATGGGCATGGCCCTGTTGCTGA TCAGCCATGACCTGAACCTGGTGCGCCGCATCGCCCACCGCGTGTGCGTGATGCAGCGCGGGCAAATTGTCGAGCAAGCC GAATGCGCCACGCTGTTCAGCTCGCCACAGCACCACTACACCCAGATGCTGATCAATGCCGAACCCAGCGGGCTGCCGGC GCACAATCCGGTGGGCGCGCCGTTGCTGGAGGTGGATGACCTCAAGGTGTGGTTCCCGATCAAGAAGGGCTTTCTGCAGC GCACGGTCGACCATGTGAAGGCGGTGGACGGGGTCAACTTCAGCTTGCCCCAGGGCCAGACGCTGGGCATTGTTGGCGAA TCCGGGTCGGGCAAGTCCACATTGGGCCTGGCGATCTTGCGGCTGATTTCCAGCCAGGGCGGCATTCGCTTTCATGGGCA GAACCTCGAAGGGCTGAACCAGAAAGCCGTGCGCCCCCTGCGGCGGGAAATGCAGGTGGTGTTCCAGGACCCGTTTGGCA GCCTGAGCCCGCGCATGTGCGTGGCGGACATTGTCGGCGAAGGGCTGCGCATCCACGGCATTGGCACCGCGCAGGAACAG GAAGCGGCGATTATCGCGGCCCTGGAGGAAGTAGGCCTGGACCCGCGCACGCGCCATCGCTACCCCCATGAGTTTTCCGG CGGGCAGCGCCAGCGCATTGCCATTGCCCGGGCGCTGGTGTTGAAGCCAGCACTGATTCTGCTGGATGAACCCACGTCCG CACTGGACCGCACCGTACAGCGGCAGGTGGTGGAATTGCTGCGTAACCTGCAGCAAAAGTACAACCTGACCTACCTGTTC ATCAGCCATGACCTGGCGGTGGTAAAGGCGTTGAGTCACCAGTTGATGGTGATCAAGCATGGGCATGTGGTGGAGCAAGG GGACGCGCAGGCGATCTTCCATGCGCCGCAGCATCCGTATACCCGGCAGTTGCTGGAGGCGGCGTTTTTGGAGGTTGGGG GTTCGTAG Protein sequence : MSEQNLIEVRDLAVEFVTGDQVNRVVDGVSFDIRKGETLALVGESGSGKSVTAHSILRLLPYPLARHPSGSIRYEGKDLL QQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEILLLHKGLTGKEATARTLELLDMVGIPEPRKRLKALPHELSG GQRQRVMIAMALANEPELLIADEPTTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQA ECATLFSSPQHHYTQMLINAEPSGLPAHNPVGAPLLEVDDLKVWFPIKKGFLQRTVDHVKAVDGVNFSLPQGQTLGIVGE SGSGKSTLGLAILRLISSQGGIRFHGQNLEGLNQKAVRPLRREMQVVFQDPFGSLSPRMCVADIVGEGLRIHGIGTAQEQ EAAIIAALEEVGLDPRTRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRNLQQKYNLTYLF ISHDLAVVKALSHQLMVIKHGHVVEQGDAQAIFHAPQHPYTRQLLEAAFLEVGGS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-75 | 43 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 1e-75 | 43 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-75 | 43 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-75 | 43 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 4e-94 | 42 |
