Gene Information

Name : algR (T1E_3777)
Accession : YP_006534402.1
Strain : Pseudomonas putida DOT-T1E
Genome accession: NC_018220
Putative virulence/resistance : Virulence
Product : LytTR family two component transcriptional regul
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4141575 - 4142318 bp
Length : 744 bp
Strand : -
Note : -

DNA sequence :
ATGAATGTCCTGATCGTTGATGACGAACCCCAAGGCCGTGAACGCCTCACCCGGCTGCTCGGCGAACTGGAGGGTTACAC
TGTGCTGGAGCCCAGCGCCACCAACGGCGATGAGGCCTTGGCGCTGATTGAAAGCCTCAAGCCCGATGTGGTCCTGCTGG
ACATCGGCATGCCAGGCCTGGATGGCCTGCAGGTTGCCGCTCGCCTGTGCGAACGCGAGGCGCCGCCCGCGGTGGTGTTT
TGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGTGACCAAGCCCTTCCAGGCCCA
CGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCCGCGCTTACCCGGCCGGCCAATGAAG
GCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGTATCGAACTGATCCCGTTACCCCAGGTGATCTATTTC
ATTGCCGACCACAAGTATGTGACCTTGCGTCACGAAGCCGGTGAAGTGCTGCTTGACGAGCCACTCAAAGCCCTGGAAGA
CGAATTTGGCGAACGCTTCGTGCGCATCCACCGCAATGCGTTGGTCGCCCGCGAGCGCATCGAACGCTTGCAGCGCACCC
CGCTGGGGCACTTTCAGCTGTATCTGAAAGGCCTGGACGGCGATGCCTTGACCGTCAGCCGTCGCCATGTGGCCGGTGTG
CGCAAGATGATGCAGACCCTCTGA

Protein sequence :
MNVLIVDDEPQGRERLTRLLGELEGYTVLEPSATNGDEALALIESLKPDVVLLDIGMPGLDGLQVAARLCEREAPPAVVF
CSGDDEYGAEAFKDSTLSHVTKPFQAHALRDALRKAEKPNRAQLAALTRPANEGGGPRSHISARTRKGIELIPLPQVIYF
IADHKYVTLRHEAGEVLLDEPLKALEDEFGERFVRIHRNALVARERIERLQRTPLGHFQLYLKGLDGDALTVSRRHVAGV
RKMMQTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00330 YP_008211656.1 Response regulator of the LytR/AlgR family Not tested AbaR26 Protein 2e-42 43
BJAB07104_00326 YP_008207791.1 Response regulator of the LytR/AlgR family Not tested AbaR25 Protein 2e-42 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
algR YP_006534402.1 LytTR family two component transcriptional regul VFG0119 Protein 2e-88 79