Gene Information

Name : hemC (T1E_3776)
Accession : YP_006534401.1
Strain : Pseudomonas putida DOT-T1E
Genome accession: NC_018220
Putative virulence/resistance : Unknown
Product : Porphobilinogen deaminase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4140515 - 4141456 bp
Length : 942 bp
Strand : -
Note : -

DNA sequence :
ATGTCCACTCGCGAAATCCGCATTGCCACCCGTAAAAGTGCTTTGGCCCTGTGGCAGGCCGAATACGTCAAGGCCCGCCT
CGAGCAGGCCCACACCGGTCTGCAGGTGACCTTGGTGCCCATGGTCAGCCGCGGTGACAAGTTGCTCGACGCGCCGCTGG
CAAAAATCGGCGGCAAGGGGCTGTTCGTCAAGGAACTGGAAACCGCGCTGTTGGACAACGAAGCCGACATCGCCGTGCAC
TCGATGAAAGACGTGCCCATGGACTTCCCCGAGGGCCTGGGCCTGTACTGCATCTGCGAGCGTGAAGACCCGCGTGATGC
CTTCGTTTCCAATACCTTTGACAGCCTCGAAGCACTGCCCGCCGGCAGTATCGTCGGTACCTCAAGCCTGCGCCGTCAGG
CCCAGTTACTGGCGCGCCGCCCAGACCTGCAAATCCGCTTTCTGCGCGGCAACGTCAACACCCGCCTGGCGAAGCTGGAT
GCCGGCGAGTACGACGCCATCATCCTCGCCGCGGCGGGCCTGATCCGTCTGGGCTTCGAGGACCGCATCACCTCCACCAT
CAGCGTCGATGACAGCCTGCCGGCAGGTGGTCAGGGCGCGGTGGGCATCGAGTGCCGCAGTGCCGACGTTGAGATCCATG
CACTGCTGGCGCCACTGCACCATGTCGACACCGCTGACCGGGTGATCGCCGAGCGCGCCCTGAACAAACGCCTGAATGGT
GGCTGCCAAGTCCCGATCGCCTGCTACGCGGTCCTTGAAGGTGACCAGCTGTGGCTGCGTGGCCTGGTCGGCCAGCCTAG
CGGCGGGACCTTGCTGGTGGCCGATGCCCGTGCACCCCGTGCCGCTGCCGAGGCCCTGGGCGTACAGGTGGCCGAAGACC
TGCTGGGGCAGGGCGCCGAGGCCATTCTGAAGGAAGCCTACGGCGAGGCTGGTCACCCGTGA

Protein sequence :
MSTREIRIATRKSALALWQAEYVKARLEQAHTGLQVTLVPMVSRGDKLLDAPLAKIGGKGLFVKELETALLDNEADIAVH
SMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFDSLEALPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLD
AGEYDAIILAAAGLIRLGFEDRITSTISVDDSLPAGGQGAVGIECRSADVEIHALLAPLHHVDTADRVIAERALNKRLNG
GCQVPIACYAVLEGDQLWLRGLVGQPSGGTLLVADARAPRAAAEALGVQVAEDLLGQGAEAILKEAYGEAGHP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 6e-67 60
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 6e-67 60