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Name : ribD (T1E_3517) Accession : YP_006534147.1 Strain : Pseudomonas putida DOT-T1E Genome accession: NC_018220 Putative virulence/resistance : Unknown Product : riboflavin biosynthesis protein RibD Function : - COG functional category : - COG ID : - EC number : - Position : 3862315 - 3863445 bp Length : 1131 bp Strand : + Note : - DNA sequence : ATGCCCAGCCAAGCTGCCATTCTCGACGCTCACTACATGGCCCGCGCGCTGGAGCTGGCGCGTAAAGGCCTGTACACCAC CCACCCGAACCCGCGCGTAGGCTGCGTGATCGTGCGCGATGGCGAAGTGGTCGGTGAAGGCTGGCACGTGCGCGCCGGCG AGCCCCATGCCGAAGTGCATGCTCTGCGCCAGGCCGGTGAACTTGCCCGCGGTGCTTGTGCCTACGTCACCCTGGAACCA TGCAGCCACCATGGCCGTACGCCACCGTGTGCCGAAGCACTGGTCAAGGCCGGCGTGGCGCGCGTAGTAGCCGCCATGCA GGACCCTAACCCACAAGTGGCGGGGCAGGGCCTGCGGCGCCTGGCCGAAGCCGGAATCGAAGTGGCCAGCGGAGTGCTCG AAGCCGAGGCCCGCGCCCTCAACCCAGGCTTCCTCAAGCGCATGGAGCACGGCCTGCCGTTCGTTCGCGCCAAGCTGGCC ATGAGCCTGGATGGCCGCACTGCCATGGCCAGTGGTGAAAGCCAGTGGATCACCGGGCCGGCCGCGCGCTCAGCCGTGCA GCGCTTGCGCGCCCGCTCCAGCGTGGTGCTGACCAGCGCCGCCAGCGTGCTGACAGACAACGCACGCATGACCGTGCGTG GCGCCGAGCTGGGCCTGGATGCCGAAACAACCGCCCTGGCACTCAGCCGCACACCCTTGCGGGTGCTGGTCGATGGCCGC CTGCGCCTGCCACTGGCGGCGCCGTTCTTCCAGGCGGGCCCAGCGCTGGTGGTGACGGCTGTCGCAGATGACCCGCGCTA TGCCGCTGCCGGCCACGAATTGCTCAGCTTGCCGGGCGACAATGGCCAGGTCGACCTGGCGGCGCTGCTTCGCGCCCTGG CTGCCCGCGGCGTCAACGAAATCCTGCTGGAAGCCGGTGCCGGCCTGGTCGGTGCCTTCGCTCGGCAAGGCCTGGTCGAC GAGTACCAGCTGTTCGTCGCTGGCACCTTCCTGGGCTCTCAGGCCCGGCCACTGCTGGACTGGCCGATGGACAAGATGAG CGAAGCACCACGGCTGAAAATTACCGAAATGCGCGCAGTGGGCGATGACTGGCGGGTCACGGCCATCCCCCTGCCAGCGC CCGGCGTATAA Protein sequence : MPSQAAILDAHYMARALELARKGLYTTHPNPRVGCVIVRDGEVVGEGWHVRAGEPHAEVHALRQAGELARGACAYVTLEP CSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGQGLRRLAEAGIEVASGVLEAEARALNPGFLKRMEHGLPFVRAKLA MSLDGRTAMASGESQWITGPAARSAVQRLRARSSVVLTSAASVLTDNARMTVRGAELGLDAETTALALSRTPLRVLVDGR LRLPLAAPFFQAGPALVVTAVADDPRYAAAGHELLSLPGDNGQVDLAALLRALAARGVNEILLEAGAGLVGAFARQGLVD EYQLFVAGTFLGSQARPLLDWPMDKMSEAPRLKITEMRAVGDDWRVTAIPLPAPGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 1e-58 | 48 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 1e-58 | 48 |
