Gene Information

Name : ssuB (T1E_2977)
Accession : YP_006533610.1
Strain : Pseudomonas putida DOT-T1E
Genome accession: NC_018220
Putative virulence/resistance : Resistance
Product : aliphatic sulfonates import ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3255004 - 3255816 bp
Length : 813 bp
Strand : -
Note : -

DNA sequence : 
ATGACCGTGCTCAAGGAACAGCCGCCACGCCTGCTGCGTGGCACCCCGCTGGCCTCCAAGGGCCTGCGCAAGACTTTTGG
CCAACGCGAAGTTTTGAAGGGTATCGACCTGCACATTCCGGCCGGCCAGTTCGTGGCCATTGTCGGCCGCAGCGGCTGCG
GCAAGAGCACTTTGCTGCGGCTACTGGCCGGGTTGGACCAGCCCACTGCCGGGCAGCTACTGGCGGGTGCCGCGCCGCTG
GAAGAGGCCCGTGAAGAAACCCGCCTGATGTTCCAGGACGCGCGGCTGCTGCCGTGGAAGAAGGTGATCGACAACGTTGG
CCTTGGGCTGTCTGGCGACTGGCGCCCGCGTGCGCTGGAGGCCTTGGATGCGGTTGGCCTGGCCGACCGCGCCAACGAAT
GGCCGGCAGCGCTCTCGGGAGGCCAGAAGCAGCGCGTGGCTTTGGCCCGAGCCTTGATTCACCAGCCCCGCCTGCTGCTG
CTGGACGAGCCACTGGGGGCGCTGGATGCATTGACCCGTATCGAGATGCAGCAACTGATCGAACGCCTGTGGCGTCAGCA
CGGCTTCACTGTGCTGCTGGTCACCCACGACGTCAGCGAGGCGGTTGCCGTGGCTGACCGGGTGATCCTGATCGAGGACG
GCGAGGTCGGGCTCGACCTCACTGTTGACCTGGCACGGCCCCGGGCGCGTGGTTCGCACCGTCTGGCCGCGCTGGAAAGC
GAAGTGCTCAACCGTGTTCTGTCCACCCCGGGCACTGCGCCCGAGCCGGATCCTGTAGCCCCTCTGCCCACGCAACTGCG
CTGGGCGCACTGA

Protein sequence : 
MTVLKEQPPRLLRGTPLASKGLRKTFGQREVLKGIDLHIPAGQFVAIVGRSGCGKSTLLRLLAGLDQPTAGQLLAGAAPL
EEAREETRLMFQDARLLPWKKVIDNVGLGLSGDWRPRALEALDAVGLADRANEWPAALSGGQKQRVALARALIHQPRLLL
LDEPLGALDALTRIEMQQLIERLWRQHGFTVLLVTHDVSEAVAVADRVILIEDGEVGLDLTVDLARPRARGSHRLAALES
EVLNRVLSTPGTAPEPDPVAPLPTQLRWAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 8e-37 47
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-21 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-23 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-23 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-23 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssuB YP_006533610.1 aliphatic sulfonates import ATP-binding protein NC_012469.1.7686878. Protein 3e-21 41