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Name : lysS (T1E_2874) Accession : YP_006533507.1 Strain : Pseudomonas putida DOT-T1E Genome accession: NC_018220 Putative virulence/resistance : Virulence Product : Lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 3139751 - 3141253 bp Length : 1503 bp Strand : + Note : - DNA sequence : ATGAGCGACCTGAAGACCGAATCGCAAGACCTGCAACAGGAAGAAAACGCCCTGATCGCCCTGCGCAAGGAAAAACTTGC CGCCGAGCGTGCCAAGGGCAATGCCTTCCCCAACGACTTCCGTCGCGACAGCTACTGCAACGACCTGCAGAAGCAGTACG CGGACAAGACCAAGGAAGAGCTGGAAGCAGCCGCGATCCCGGTCAAGGTAGCCGGCCGCATCATGCTCAACCGTGGCTCG TTCATGGTTATCCAGGACATGACTGGCCGTATTCAGGTCTACGTCAACCGCAAGACCCTGCCGGAAGAAACCCTGGCCGC GGTCAAGACCTGGGACCTGGGCGACATCATCAGCGCCGAAGGCACCCTGGCCCGTTCCGGCAAGGGCGACCTGTACGTCG AAATGACCAACGTACGCCTGCTGACCAAGTCGCTGCGCCCGCTGCCCGACAAGCACCACGGCCTGACCGACACCGAGCAG CGCTACCGCCAGCGTTACGTCGACCTGATGGTCAACGAAGAAACCCGCCACACCTTCCGTGTGCGTTCGCAGGTGATCTC GCACATCCGCAAGTTCCTCATCGAGCGCGACTTCCTTGAAGTCGAAACGCCGATGCTGCAGACCATCCCGGGCGGTGCGG CAGCCAAGCCGTTCGAAACCCACCACAACGCCCTGGACATGGCCATGTTCCTGCGTATCGCGCCGGAGCTGTACCTCAAG CGCCTGGTCGTGGGTGGCTTCGAAAAAGTGTTCGAGATCAACCGTAACTTCCGCAACGAAGGCGTTTCGACTCGTCACAA CCCTGAGTTCACCATGCTCGAGTTCTACCAGGCCTACGCCGACTACCGCGACAACATGGACCTCACCGAGGAACTGTTCC GCGAGCTGGCGCAACTGGTACTGGGCTCTACCGACGTACCGTACGGCGACAAGGTCTTCCACTTCGGCGAGCCGTTCGTA CGCCTGTCGGTGTTCGACTCGATCCTCAAGTACAACCCGGAGCTGACCGCTGCCGACCTGCAGGACGTCGACCGCGCCCG TGAGATTGCCAAGAAGGCCGGTGCCAAGGTGCTGGGCCACGAAGGCCTGGGCAAGTTGCAGGTGATGATTTTCGAAGAGC TGGTCGAGCACAAGCTGGAACAGCCGCACTTCATTACCGAGTACCCGTTCGAAGTGTCGCCGCTGGCCCGTCGCAACGAC GACAACCCGGCCGTTACCGACCGTTTCGAGCTGTTCATCGGTGGCCGCGAAATCGCCAACGCCTACTCCGAGCTCAACGA TGCCGAAGATCAGGCCGAGCGCTTCCTGGCCCAGGTGGCCGAGAAGGACGCGGGTGACGATGAAGCCATGCACTATGACG CCGACTTCGTTCGTGCGCTGGAGTACGGCATGCCGCCGACCGCCGGTGAAGGTATCGGCATCGACCGCCTGGTGATGCTG CTGACCAACTCGCCGTCGATCCGCGACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGA Protein sequence : MSDLKTESQDLQQEENALIALRKEKLAAERAKGNAFPNDFRRDSYCNDLQKQYADKTKEELEAAAIPVKVAGRIMLNRGS FMVIQDMTGRIQVYVNRKTLPEETLAAVKTWDLGDIISAEGTLARSGKGDLYVEMTNVRLLTKSLRPLPDKHHGLTDTEQ RYRQRYVDLMVNEETRHTFRVRSQVISHIRKFLIERDFLEVETPMLQTIPGGAAAKPFETHHNALDMAMFLRIAPELYLK RLVVGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYRDNMDLTEELFRELAQLVLGSTDVPYGDKVFHFGEPFV RLSVFDSILKYNPELTAADLQDVDRAREIAKKAGAKVLGHEGLGKLQVMIFEELVEHKLEQPHFITEYPFEVSPLARRND DNPAVTDRFELFIGGREIANAYSELNDAEDQAERFLAQVAEKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVML LTNSPSIRDVILFPHMRPQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-137 | 60 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 3e-78 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_006533507.1 | Lysyl-tRNA synthetase | VFG1668 | Protein | 9e-138 | 60 |
