Gene Information

Name : xerD (T1E_2846)
Accession : YP_006533479.1
Strain : Pseudomonas putida DOT-T1E
Genome accession: NC_018220
Putative virulence/resistance : Unknown
Product : Tyrosine recombinase xerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3110160 - 3111056 bp
Length : 897 bp
Strand : +
Note : -

DNA sequence :
ATGCCCGCCCTCGACCACCCCCTGATCGACCAGTTCCTTGACGCCCTATGGCTGGAAAAAGGCCTGTCCGACAACACCCG
CGTGTCCTACCGCAGCGACCTGGCCCTGTTCAATGGCTGGCTGCAGGAGCATTCGGTAGCGCTGCCGGACGCCGGCCGCG
ACTTGATCCTCGATCACTTGGCCTGGCGCCTGGATCAGGGCTACAAGCCACGTTCCACGGCGCGTTTCCTCTCCGGTCTG
CGCGGCTTTTTCCGTTACCTGCTGCGGGAAAAGCTGGTGGCCATCGACCCGACCCTGCAGGTCGACATGCCGCAATTGGG
CAAGCCGCTGCCCAAGTCGCTGTCCGAAGCCGACGTCGAAGCCCTGTTGCAGGCTCCGGACCTGGGCGAAGCCATTGGCC
AACGCGACCGTGCCATGCTCGAAGTGCTCTACGCGTGCGGCCTTCGGGTTACCGAACTGGTCAGCCTGACCCTCGACCAG
GTCAACCTGCGCCAGGGTGTGCTGCGGGTGATGGGCAAGGGCAGCAAGGAACGTCTGGTACCCATGGGTGAAGAGGCGGT
GGTGTGGTTGGAGCGCTACCAGCGCGATGGTCGCGCCGAACTGCTCAATGGCCGTCCCAGCGACGTGCTGTTCCCCAGTC
AGCGCGGCGAGCAGATGACGCGCCAGACCTTCTGGCACCGCATCAAACACCACGCACGGGTTGCCGGCATCGACAAGCCG
CTGTCGCCGCACACCCTGCGGCATGCCTTCGCCACCCACCTGCTCAACCACGGTGCCGACTTGCGGGTGGTGCAGATGCT
GCTGGGCCACAGTGACCTGTCGACCACGCAGATCTATACCCACGTCGCCAAGGCCCGCCTGCAGCAGTTGCACGCCCAGC
ACCACCCGCGTGGATGA

Protein sequence :
MPALDHPLIDQFLDALWLEKGLSDNTRVSYRSDLALFNGWLQEHSVALPDAGRDLILDHLAWRLDQGYKPRSTARFLSGL
RGFFRYLLREKLVAIDPTLQVDMPQLGKPLPKSLSEADVEALLQAPDLGEAIGQRDRAMLEVLYACGLRVTELVSLTLDQ
VNLRQGVLRVMGKGSKERLVPMGEEAVVWLERYQRDGRAELLNGRPSDVLFPSQRGEQMTRQTFWHRIKHHARVAGIDKP
LSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAKARLQQLHAQHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 9e-67 62
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 9e-67 62