Gene Information

Name : arsB (T1E_2721)
Accession : YP_006533354.1
Strain : Pseudomonas putida DOT-T1E
Genome accession: NC_018220
Putative virulence/resistance : Resistance
Product : arsenical pump membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2973822 - 2975105 bp
Length : 1284 bp
Strand : -
Note : -

DNA sequence :
ATGCTGCCCGCCATTGCTGTCTTCGTCTTCACCCTCATACTGGTCATCTGGCAGCCCAAGGGGCTCGGTGTTGGCTGGAG
CGCCGCGCTAGGCGCCATCATCGCCCTGGCTACAGGCGCCGTTTCACTGCATGACATCCCTGCCGTATGGGCCATTGTCT
GGAACGCCACCGCCACGTTCATCGCGGTCATCATCATCAGCTTGCTGCTGGATGAGGCCGGTTTCTTCGAATGGGCCGCA
TTGCATGTGGCGCGTTGGGCAAACGGCAGCGGCTACCGCCTGTTCGCCTTCTGCATACTGCTCGGCGCCGCTGTATCGGC
GCTGTTCGCCAACGACGGTGCGGCGCTGATCCTCACCCCCATCGTCATGTCGATGCTGCTCGCGCTGCGCTTCTCACCTG
CAGCGACACTGGCCTTTGTCATGGCCGCAGGCTTCATTGCCGACACGGCCAGCCTGCCGCTGGTGGTCTCCAACCTGGTC
AATATCGTCTCGGCCGACTACTTCGGCCTGGGCTTCGCCGAATACGCATCGGTGATGGTGCCGGTGAATATCGCCAGCGT
GGCGGCCACCCTGCTGGTGCTGTTTCTGTACTTCCGTCGTGATATCCCCAGGCAGTACGCGCTCGATGCGCTGAAGGCGC
CAAGCGAGGCAATTCATGACCACGCCACCTTCAAAGTCGGTGGGTGGGTGCTGCTGGTGTTGCTTGCAGGCCTGTTCGTA
CTGGAACCTCTGGGCATCCCGATCAGTGCGGTGGCCGCCGTCTGTGCCGCAATCCTCTTTGCCGTGGCCGCTCGCGGTCA
CCGCATCTCAACCCGTCGCGTGCTGCGGGAAGCGCCGTGGCAGGTGGTGATTTTTTCTCTGGGCATGTATCTGGTGGTGT
ACGGCCTGAAGAACGCCGGCCTCACGGACATGCTCACCCACCTGCTGGACAGGCTTGCCGAGCAGGGCCTGTGGAGCGCG
GCCATTGGCACCGGGTTGATCTCCGCGCTGCTGTCCTCAGTCATGAACAACATGCCCAGCGTGCTGATCGGCGCCTTGTC
GATCCAGGCCAGCGGCGCAGAGGGCGTGGTACGTGAGGCGATGATCTACGCCAACGTCATCGGCTGCGACCTCGGCCCGA
AGATCACCCCGATTGGCAGCCTCGCCACACTGCTTTGGCTGCATGTGCTGGCGCGTAAAGGCATGCGCATCACCTGGGGT
TACTACTTCAAGGTCGGCCTGCTGCTCACCGTACCGGTTTTGCTGATCACCCTTTCTGCTCTGGCAATGCGCCTGAGTCT
CTGA

Protein sequence :
MLPAIAVFVFTLILVIWQPKGLGVGWSAALGAIIALATGAVSLHDIPAVWAIVWNATATFIAVIIISLLLDEAGFFEWAA
LHVARWANGSGYRLFAFCILLGAAVSALFANDGAALILTPIVMSMLLALRFSPAATLAFVMAAGFIADTASLPLVVSNLV
NIVSADYFGLGFAEYASVMVPVNIASVAATLLVLFLYFRRDIPRQYALDALKAPSEAIHDHATFKVGGWVLLVLLAGLFV
LEPLGIPISAVAAVCAAILFAVAARGHRISTRRVLREAPWQVVIFSLGMYLVVYGLKNAGLTDMLTHLLDRLAEQGLWSA
AIGTGLISALLSSVMNNMPSVLIGALSIQASGAEGVVREAMIYANVIGCDLGPKITPIGSLATLLWLHVLARKGMRITWG
YYFKVGLLLTVPVLLITLSALAMRLSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 3e-123 72
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 3e-96 57
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 2e-93 56
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 6e-97 56

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
arsB YP_006533354.1 arsenical pump membrane protein BAC0578 Protein 2e-124 74
arsB YP_006533354.1 arsenical pump membrane protein BAC0031 Protein 2e-125 73
arsB YP_006533354.1 arsenical pump membrane protein BAC0576 Protein 3e-124 73
arsB YP_006533354.1 arsenical pump membrane protein BAC0577 Protein 1e-118 71
arsB YP_006533354.1 arsenical pump membrane protein BAC0574 Protein 2e-96 57
arsB YP_006533354.1 arsenical pump membrane protein BAC0575 Protein 9e-97 56