Gene Information

Name : T1E_2684 (T1E_2684)
Accession : YP_006533317.1
Strain : Pseudomonas putida DOT-T1E
Genome accession: NC_018220
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2934906 - 2936426 bp
Length : 1521 bp
Strand : +
Note : -

DNA sequence :
ATGATCTACGCACAACCCGGAACTCCAGGCGCCGTCGTATCCTTCAAACCCCGTTATGGCAACTTCATCGGTGGCGAGTT
CGTGCAGCCGTTGGCTGGCCAGTACTTCACCAACAGCTCGCCGGTCAATGGCCAGCCGATTGCCGAATTCCCGCGCTCCA
CGGCCCAGGACGTCGAGCGCGCCCTGGACGCCGCGCATGCCGCCGCCGAAGCCTGGGGCAAGACCTCGGTGCAAGACCGT
GCGCGGGTACTGCTCAAAATTGCCGACCGCATCGAACAGAACCTGGAAGTGCTGGCGGTTACCGAAAGCTGGGACAACGG
CAAGGCCATACGCGAAACCTTGAATGCCGACGTGCCGCTGGCAGCGGACCACTTCCGCTATTTTGCCGGTTGCATCCGCG
CCCAGGAGGGTAGCGTAGGCGAAATCAACGAAGGTACCGTGGCTTATCACATCCACGAGCCGCTGGGTGTGGTGGGGCAG
ATCATCCCGTGGAACTTCCCGCTGCTGATGGCCGCCTGGAAGCTCGCCCCGGCCTTGGCCGCTGGCAACTGCGTGGTGCT
CAAGCCCGCGGAACAGACGCCGCTGTCGATTACCGTCTTTGCCGAACTGATCGCCGACCTGTTGCCGGCAGGCGTACTGA
ACATCGTCCAGGGCTTTGGCCGTGAGGCCGGCGAGGCGCTGGCCACCAGCAAGCGCATTGCCAAGATCGCGTTCACCGGG
TCCACCCCGGTGGGCTCGCACATCATGAAGTGCGCGGCCGAGAACATCATCCCGTCCACCGTCGAACTGGGTGGCAAGTC
GCCGAACATTTTCTTCGAAGACATCATGCAGGCCGAGCCGGCATTTATCGAGAAGGCTGCCGAAGGCCTGGTGCTGGCGT
TCTTCAACCAGGGCGAGGTGTGCACCTGCCCGTCACGGGCGCTGATCCAGGAGTCGATCTACGAACCGTTCATGGCCGAG
GTGATGAAGAAGATCGCCAAGATCACCCGCGGCAACCCGCTGGATACCGAAACCATGGTGGGTGCCCAGGCGTCCGAGCA
ACAGTACGACAAGATCCTTTCGTACCTGGAGATTGCCCGGGAGGAGGGCGCGCAGCTGCTCACCGGCGGTGGTGCCGAGC
GGCTGCAGGGTGACCTGGCCAGCGGTTACTACATTCAGCCAACCCTGCTCAAGGGCAACAACAAGATGCGCGTGTTCCAG
GAAGAAATCTTCGGGCCAGTGGTGGGCGTGACCACCTTCAAGGACGAAGCCGAAGCGTTGGCGATCGCCAACGACAGTGA
ATTCGGCCTGGGCGCCGGCCTGTGGACCCGCGACATCAACCGCGCTTACCGCATGGGCCGCGGGATCAAGGCCGGGCGCG
TGTGGACCAACTGCTACCACCTGTACCCGGCGCATGCGGCGTTCGGGGGGTACAAGAAGTCCGGTGTTGGCCGTGAGACC
CACAAGATGATGCTTGACCATTATCAGCAGACCAAGAACTTGCTGGTGAGCTACGACATCAATCCGCTGGGCTTCTTCTA
A

Protein sequence :
MIYAQPGTPGAVVSFKPRYGNFIGGEFVQPLAGQYFTNSSPVNGQPIAEFPRSTAQDVERALDAAHAAAEAWGKTSVQDR
ARVLLKIADRIEQNLEVLAVTESWDNGKAIRETLNADVPLAADHFRYFAGCIRAQEGSVGEINEGTVAYHIHEPLGVVGQ
IIPWNFPLLMAAWKLAPALAAGNCVVLKPAEQTPLSITVFAELIADLLPAGVLNIVQGFGREAGEALATSKRIAKIAFTG
STPVGSHIMKCAAENIIPSTVELGGKSPNIFFEDIMQAEPAFIEKAAEGLVLAFFNQGEVCTCPSRALIQESIYEPFMAE
VMKKIAKITRGNPLDTETMVGAQASEQQYDKILSYLEIAREEGAQLLTGGGAERLQGDLASGYYIQPTLLKGNNKMRVFQ
EEIFGPVVGVTTFKDEAEALAIANDSEFGLGAGLWTRDINRAYRMGRGIKAGRVWTNCYHLYPAHAAFGGYKKSGVGRET
HKMMLDHYQQTKNLLVSYDINPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-149 66
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 6e-157 65
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 6e-157 65
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 6e-157 65
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-156 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
T1E_2684 YP_006533317.1 aldehyde dehydrogenase VFG0082 Protein 5e-150 66