|
Name : T1E_2308 (T1E_2308) Accession : YP_006532948.1 Strain : Pseudomonas putida DOT-T1E Genome accession: NC_018220 Putative virulence/resistance : Unknown Product : Na+/H+ antiporter NhaC Function : - COG functional category : - COG ID : - EC number : - Position : 2527505 - 2528824 bp Length : 1320 bp Strand : + Note : - DNA sequence : ATGAATGCAGTGATCGCCGCGGTCGGCATCATGCTGATACTCAGCCTGTCCCGCGTGCACGTGGTCATCGCCCTGATCAT CGGCGCCCTGGCCGGTGGGCTGGTGGGCGGCCTGGGCATCGAAGGCACGCTCAAGGCCTTCAACGGTGGCCTCGGCGGTG GTGCCACGGTGGCTTTGTCCTATGCACTGCTGGGTGCCTTTGCCGTGGCAATCGCCAAGTCTGGCCTGGCCCATGCGCTG GCCGACCGCGCCCTGGCCATGATCGACCGACAGGGCGACGCCAAGGGCGGCAAGGTCAAATGGCTGATGATCGGCCTGAT GCTGGTGGTGGCCGTGTCGTCCCAGAACATCCTGCCCATCCACATTGCCTTCATTCCGCTGCTGGTACCCCCTCTGTTGT ACGTGCTGACGCGCCTGCGTATCGACCGCCGGCTGATCGCCTGTGTGATCACCTTTGGCCTGATCACCCCGTACATGTTC CTGCCGGTGGGCTTCGGCAACATCTTCCTCAACGAGATCCTGTTGGCCAATGTGGCCCGCGCGGGTGTCGATGTGAGCGG CGTCAACGTCACCCACGCCATGGCCGTCCCGGCTGCCGGCATGCTCGTCGGCCTGCTGGTGGCGGTGTTCATCAGCTACC GCAAGAAGCGTGACTACGACCTGGCGCGGATCCAGCAGGTGGAGCAGGTGAGTGTGCAGTACAACCCGTTGACCTTGCTG GTGGCCGGGCTGGCGATCGCGGCAGCCTTCATTGTCCAGCTGTTGCTGGACTCGATGATCATCGGTGCCATGGTCGGTTT CCTGATCTTCTCGCTGTCGGGCATCGTCAAGTGGAAAGAGACCGACGACCTGTTCACCGAAGGCATGAAGATGATGGCCA TGATCGGCTTCATCATGATTACCGCGTCCGGTTTTGCCGAGGTGATGAAGGCCACCGGTGAGGTGAAGAGCCTGGTGGAA ACCTCGGCGCAGTGGATCGACCACAGCAAGGGCGTCGGTGCTCTGCTGATGCTGTTGGTAGGCCTTTTGGTGACGATGGG GATCGGCTCGTCGTTCTCCACCGTGCCGATCCTGGCGGCGATTTTCGTGCCACTGTGCGTGCAACTGGGCTTCGACCCGT TGGCCACGGTGTGCATCATTGGTACTGCCGGTGCGCTGGGTGATGCAGGTTCGCCGGCCTCGGACTCGACCCTGGGCCCG ACCTCGGGCCTGAACGTGGATGGCCAGCACCACCACATCTGGGACACCGTGGTGCCGACCTTCATCCATTACAACCTGCC GCTGCTGGCGTTCGGTTGGTTGGCGGCGATGACCTTGTAA Protein sequence : MNAVIAAVGIMLILSLSRVHVVIALIIGALAGGLVGGLGIEGTLKAFNGGLGGGATVALSYALLGAFAVAIAKSGLAHAL ADRALAMIDRQGDAKGGKVKWLMIGLMLVVAVSSQNILPIHIAFIPLLVPPLLYVLTRLRIDRRLIACVITFGLITPYMF LPVGFGNIFLNEILLANVARAGVDVSGVNVTHAMAVPAAGMLVGLLVAVFISYRKKRDYDLARIQQVEQVSVQYNPLTLL VAGLAIAAAFIVQLLLDSMIIGAMVGFLIFSLSGIVKWKETDDLFTEGMKMMAMIGFIMITASGFAEVMKATGEVKSLVE TSAQWIDHSKGVGALLMLLVGLLVTMGIGSSFSTVPILAAIFVPLCVQLGFDPLATVCIIGTAGALGDAGSPASDSTLGP TSGLNVDGQHHHIWDTVVPTFIHYNLPLLAFGWLAAMTL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Cp1002_1472 | YP_005681739.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 1e-99 | 59 |
| cpfrc_01481 | YP_003783881.1 | hypothetical protein | Not tested | PiCp 5 | Protein | 1e-99 | 59 |
| CpC231_1474 | YP_005683838.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 8e-100 | 59 |
| CpI19_1481 | YP_005685924.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 8e-100 | 59 |
| BJAB07104_00352 | YP_008207817.1 | putative permease | Not tested | AbaR25 | Protein | 1e-92 | 52 |
| BJAB0868_00356 | YP_008211682.1 | putative permease | Not tested | AbaR26 | Protein | 1e-92 | 52 |
