Gene Information

Name : T1E_1951 (T1E_1951)
Accession : YP_006532591.1
Strain : Pseudomonas putida DOT-T1E
Genome accession: NC_018220
Putative virulence/resistance : Unknown
Product : Nucleoid-associated protein ndpA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2135221 - 2136228 bp
Length : 1008 bp
Strand : -
Note : -

DNA sequence :
ATGCCAATCCGTCATTGCATCGTTCACCTGATCGACAAAAAGCCCGATGGCAGCCCCGCCGTGCTGCATGCTCGCGACTC
CGAACTGGCTGCCTCCGATGCCATCGAAAACCTCCTGGCCGACCTCAATGACAGCTACAACGCCAAGCAAGGCAAGGCCT
GGGGTTTTTTCCATGGCGAATCGGGCGCCTACCCGCTGAGCGGCTGGCTGAAGCAGTACCTGGAGGGGGAAAAGGACTTC
ACCGCCTTCAGCCGCGTGGCTGTCGAGCATCTGCAGAAGCTGATGGAAGAGTCCAACCTGTCCACCGGCGGCCACATCCT
GTTTGCCCACTATCAGCAAGGCATGACCGAGTACCTGGCGATCGCCCTGCTGCACCATAGCGAAGGCGTGGCGGTGAATG
CCGAGCTCGACGTGACCCCTTCCCGTCATCTCGACCTTGGCCAGCTGCACCTGGCAGCACGCATCAACCTGTCGGAGTGG
AAGAACAACCAGAACTCCAGGCAGTATATTTCGTTCATCAAGGGCAAGAACGGCAAGAAGGTGTCGGATTACTTCCGCGA
CTTCATCGGCTGCCAGGAAGGCGTCGACGGCCCGGGCGAAACGCGTACCCTGCTCAAGGCCTTCAGCGATTTCGTCGAAA
GCGAAGACCTGCCGGAAGAATCCGCCCGCGAAAAGACCCAGACCCTGGTCGAGTACGCCACCACCCAGACCAAGCTGGGC
GAGCCGGTGACGCTCGAAGAGCTGTCCAGCCTGATCGACGAAGACCGCCCCAAAGCGTTCTACGACCACATCCGCAACAA
GGACTACGGCCTGTCGCCGGAAATCCCTGCTGACAAGCGCACCCTCAACCAGTTCCGCCGTTTCACCGGGCGTGCCGAGG
GGCTGTCGATCAGCTTCGAGGCACATTTGCTGGGGGACAAGGTGGAGTATGACGAAGCGGCGGGGACCTTGATCATCAAG
GGGCTGCCGACAACCTTGGTGGATCAGCTGAAGCGCCGCAAGGACTGA

Protein sequence :
MPIRHCIVHLIDKKPDGSPAVLHARDSELAASDAIENLLADLNDSYNAKQGKAWGFFHGESGAYPLSGWLKQYLEGEKDF
TAFSRVAVEHLQKLMEESNLSTGGHILFAHYQQGMTEYLAIALLHHSEGVAVNAELDVTPSRHLDLGQLHLAARINLSEW
KNNQNSRQYISFIKGKNGKKVSDYFRDFIGCQEGVDGPGETRTLLKAFSDFVESEDLPEESAREKTQTLVEYATTQTKLG
EPVTLEELSSLIDEDRPKAFYDHIRNKDYGLSPEIPADKRTLNQFRRFTGRAEGLSISFEAHLLGDKVEYDEAAGTLIIK
GLPTTLVDQLKRRKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
RL104 AAP84229.1 conserved hypothetical protein Not tested PAPI-1 Protein 1e-135 81