Gene Information

Name : glnA (T1E_0178)
Accession : YP_006530828.1
Strain : Pseudomonas putida DOT-T1E
Genome accession: NC_018220
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 200035 - 201441 bp
Length : 1407 bp
Strand : +
Note : -

DNA sequence :
ATGTCGAAGTCGGTTCAACTCATCAAAGATCATGACGTCAAGTGGATTGATCTGCGTTTCACGGACACCAAAGGCATTCA
GCACCACGTGACCATGCCGTCGCGTGATGCGCTGGACGAAGACTTCTTCGAAGTCGGCAAGATGTTCGACGGTTCCTCCA
TCGCTGGCTGGAAAGGCATCGAAGCTTCCGACATGATCCTGATGCCGGTCGACGAAACCGCCGTTCTGGACCCGTTCACC
GAAGAACCAACCCTGATCATCACCTGCGACATCGTCGACCCGTCGAGCATGCAGGGCTACGATCGCGACCCACGCGCCAT
CGCCAAGCGCGCTGAAGAGTACCTGAAGAGCACCGGCATCGGTGACACCGTATTCGCCGGCCCAGAGCCTGAGTTCTTCA
TCTTCGACGAAGTGAAGTTCCACTCGGACATCTCCGGTTCGATGTTCAAGATCTTCTCCGAGCAGGGCTCGTGGATGACC
GGCGCTGACGTGGAAGGCGGCAACAAAGGCCACCGTCCAGGCGTGAAAGGCGGCTACTTCCCGGTTCCGCCGTTCGACCA
CGACCACGAAATCCGTACTGCCATGTGCAACGCCCTGGAAGAAATGGGCCAGACCGTTGAAGTTCACCACCACGAAGTGG
CGACTGCCGGCCAGAACGAAATCGGCGTCAAGTTCAACACCCTGGTGAAGAAGGCTGACGAAGTACAGGCGCTGAAATAC
GTCGTGCACAACGTTGCCGACGCTTACGGCCGTACCGCCACCTTCATGCCGAAGCCACTGTACGGCGACAACGGCTCGGG
CATGCACGTGCACATGTCGATCTGGAAAGACGGCAAGAACACCTTCTCGGGTGAAGGCTATGCCGGCCTGTCCGACACCG
CCCTGTACTTCATCGGCGGTATCATCAAGCACGGTAAGGCCCTGAACGGCTTCACCAACCCGTCGACCAACTCGTACAAG
CGTCTGGTCCCAGGCTTCGAAGCCCCGGTAATGCTGGCCTACTCGGCTCGCAACCGTTCCGCCTCGATCCGTATTCCTTA
CGTTGGCAGCCCGAAAGCCCGCCGTATCGAAGCACGTTTCCCGGACCCATCGGCCAACCCGTACCTGGCGTTCGCGGCCC
TGCTGATGGCTGGCCTGGACGGCATCCAGAACAAGATCCACCCAGGCGACGCGGCCGACAAGAACCTGTACGACCTGCCG
CCAGAAGAAGCCAAGAACATCCCGCAAGTGTGCGGCAGCCTGAAAGAAGCTCTGGAAGAGCTGGATAAAGGCCGTGCGTT
CCTGACCAAGGGCGGCGTGTTCTCCGATGACTTCATCGACGCCTTCATCGAACTGAAGAGCGAAGAAGAAATCAAGGTCC
GTACCTTCGTACACCCGCTGGAATACGAGCTGTACTACAGCTGCTGA

Protein sequence :
MSKSVQLIKDHDVKWIDLRFTDTKGIQHHVTMPSRDALDEDFFEVGKMFDGSSIAGWKGIEASDMILMPVDETAVLDPFT
EEPTLIITCDIVDPSSMQGYDRDPRAIAKRAEEYLKSTGIGDTVFAGPEPEFFIFDEVKFHSDISGSMFKIFSEQGSWMT
GADVEGGNKGHRPGVKGGYFPVPPFDHDHEIRTAMCNALEEMGQTVEVHHHEVATAGQNEIGVKFNTLVKKADEVQALKY
VVHNVADAYGRTATFMPKPLYGDNGSGMHVHMSIWKDGKNTFSGEGYAGLSDTALYFIGGIIKHGKALNGFTNPSTNSYK
RLVPGFEAPVMLAYSARNRSASIRIPYVGSPKARRIEARFPDPSANPYLAFAALLMAGLDGIQNKIHPGDAADKNLYDLP
PEEAKNIPQVCGSLKEALEELDKGRAFLTKGGVFSDDFIDAFIELKSEEEIKVRTFVHPLEYELYYSC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 5e-104 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_006530828.1 glutamine synthetase VFG1399 Protein 2e-106 52