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Name : outF (T1E_1680) Accession : YP_006532324.1 Strain : Pseudomonas putida DOT-T1E Genome accession: NC_018220 Putative virulence/resistance : Unknown Product : general secretion pathway protein F Function : - COG functional category : - COG ID : - EC number : - Position : 1838594 - 1839796 bp Length : 1203 bp Strand : - Note : - DNA sequence : ATGCCGACCTATCGCTACCAGGCCGTTGACCTCGCCGGCAAATCGCACAAGGCCAGCCTGCAGGCTGACAGTGAACGCCA CGCCCGCCAGCTGCTGCGCGAGCAGGGCCTGTTCGCCCGCCAGTTGCAGCGCCATGAAGCCGGCAGCCGACAACCCCGAC GCCAGCGCCTGAGCCGCGCCCAGTTGTGTGAGCTGACCCGTCAGCTGGCCACCTTGACCGGGGCCGGCATTCCCTTGGTC GATGCCCTTGCCACCCTTGAACGGCAACTGCGTCAACCCGCCTTGCACAGTGTGCTGGTGGCCTTGCGCGGCTCACTGGC CGAAGGCCTGGGCCTGGCCCGCAGCCTGGCCCGGCAGGGTGCACCGTTCACTGGCCTTTACTGCGCGCTGGTCGAGGCCG GCGAACGTTCCGGGCACCTGGCCCAGGTGCTGACCCGCTTGGCCGACCACCTGGAGCAGGTGCAACGCCAGCAACACAAG GCCCGCACAGCGCTGATCTACCCCGCTGTGCTGATGGGGGTATCGCTGGCCGTGGTGATTGGCCTGATGACGTTCGTCGT GCCCAAACTCACCGAGCAATTCGCCCATGCCGGGCAAAGCCTGCCGCTGATCACCTCGTTGCTGATCGGCCTGAGCCAGG GGCTGGTGCACGCCGGGCCCTGGTTGTTAGGGGTGGCGCTGTTGCTCGGGGGGCTGGCTGGCTGGCTGCTGCGCAAACCG CACTGGTGCCTGCGTCGCGACCAGCTGCTGCTGCGCCTGCCGCGTATTGGCAGCCTGCTGCAGGTGCTGGAGAGCGCGCG CCTGGCGCGCAGCCTGGCGATTCTCTGTGGCAGTGGCGTGGCCCTGCTCGAAGCCTTGCAAGTGGCCACCGAAACCATCG GCAACCGGCGTATCCGCCTGGCCATGGAGCAGGTGCGCCAACACGTGCAGGGCGGCACCAGCCTGCACCGTGCGCTGGAT GCCAGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGTCGGCAGCGGCGAGGCCAGCGGCACCCTCGCGGACATGCTCGA GCGCGTGGCCGACGACCAGGAGCGCGGCTTTGCCCGCCAGGTCGATACCGCCATGGCGCTGTTCGAACCCCTGATGATCC TGGTGATGGGCGCCGTGGTGCTGTTCATCGTGCTGGCGGTGCTGCTGCCGATCATGCAACTCAACCAGGGCCTGCAATTG TGA Protein sequence : MPTYRYQAVDLAGKSHKASLQADSERHARQLLREQGLFARQLQRHEAGSRQPRRQRLSRAQLCELTRQLATLTGAGIPLV DALATLERQLRQPALHSVLVALRGSLAEGLGLARSLARQGAPFTGLYCALVEAGERSGHLAQVLTRLADHLEQVQRQQHK ARTALIYPAVLMGVSLAVVIGLMTFVVPKLTEQFAHAGQSLPLITSLLIGLSQGLVHAGPWLLGVALLLGGLAGWLLRKP HWCLRRDQLLLRLPRIGSLLQVLESARLARSLAILCGSGVALLEALQVATETIGNRRIRLAMEQVRQHVQGGTSLHRALD ASQQFPPLLVNMVGSGEASGTLADMLERVADDQERGFARQVDTAMALFEPLMILVMGAVVLFIVLAVLLPIMQLNQGLQL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 1e-49 | 42 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-48 | 42 |
