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Name : rci (T1E_1310) Accession : YP_006531957.1 Strain : Pseudomonas putida DOT-T1E Genome accession: NC_018220 Putative virulence/resistance : Unknown Product : integrase family protein Function : - COG functional category : - COG ID : - EC number : - Position : 1498797 - 1499774 bp Length : 978 bp Strand : + Note : - DNA sequence : ATGGCCACTTACGAGCAGCGCCCAGGCGGCGCATGGCGGGCAAAGATCCGCCGGAAAGGATACCCGTCTCTCTCAGCGAC CTTCGACACCAAGGCCGAGGCCCAGCGCTGGGCAGCGGAGATCGAGGGCGACATGTCGCGCGCCCGTTTCGTCGATATGC GAGAGGCGGAGCGAACCACCCTGACTGAAGCCTTGGATCGGTACTCCAGGGAAGTCAGCTCGACCAAGAAAGGCGCGAAG CAGGAGCAGACCCGGATCAACAAGTGGAAGAAGCATCCATTTGCCGGTAAAGGCCTGGCTGCTTTGCGATCAAGTGATTT TGCGTCGTTCAGGGATGAAGAGCTCAAGGCCGGCAAGTCCACGGCCACAGTCAGGCTCGACCTGGCAATCATCAGCCACC TGTTCACGGTAGCCATCAAGGACTGGGGTATTGAGGGGCTGAGCAACCCGATGATGAAACTGCGCATGCCCAAGGGGGCA AAGGAGAGGGATCGCCGGCCGAAGAGCTTCGAGCTGGCCGGCGTTATCGAGAAGGCGGGAGCGATTCACGCCGAGATGCC GGCGATCATCCAGATTGCGGTAGAGACGGCGATGCGGCGAAGCGAGCTGCTGGGCCTGCGCCGGGAGAATGTGAAGGCCA AGCATGTGCTGCTCGAGGACACCAAGAACGGTACCCGGCGCCTGGTCCCACTCTCCACCAAGGCGCGGGCGCTCATTGAC GGGTTGCCGGCGCGTCTGGATGGAAAAGTGTTCTCGCTGGCGCCGCACTCGGTGAGCCAGTATTTCAACCGGGCCTGCAA AGCGGCCAAGGTAGAAGACCTGCACTTCCATGACCTGCGCCACGAAGGTACATCCAGGCTCTTCGAGAAGGGATTGTCGA TCATGGAGGTGGCATCGATCACCGGCCACAAAACGATGAGCATGCTCAAACGATATACCCACCTTTGCCCCGACGCGCTG GCGGACAAGCTGGGTTAG Protein sequence : MATYEQRPGGAWRAKIRRKGYPSLSATFDTKAEAQRWAAEIEGDMSRARFVDMREAERTTLTEALDRYSREVSSTKKGAK QEQTRINKWKKHPFAGKGLAALRSSDFASFRDEELKAGKSTATVRLDLAIISHLFTVAIKDWGIEGLSNPMMKLRMPKGA KERDRRPKSFELAGVIEKAGAIHAEMPAIIQIAVETAMRRSELLGLRRENVKAKHVLLEDTKNGTRRLVPLSTKARALID GLPARLDGKVFSLAPHSVSQYFNRACKAAKVEDLHFHDLRHEGTSRLFEKGLSIMEVASITGHKTMSMLKRYTHLCPDAL ADKLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rci | NP_458640.1 | shufflon-specific DNA recombinase | Not tested | SPI-7 | Protein | 4e-40 | 42 |
| rci | NP_807850.1 | shufflon-specific DNA recombinase | Not tested | SPI-7 | Protein | 4e-40 | 42 |
| rci | AAC38070.2 | Rci | Not tested | SPI-7 | Protein | 3e-40 | 42 |
| unnamed | ABR13530.1 | site-specific recombinase | Not tested | PAGI-8 | Protein | 2e-45 | 41 |
