Gene Information

Name : T1E_1230 (T1E_1230)
Accession : YP_006531879.1
Strain : Pseudomonas putida DOT-T1E
Genome accession: NC_018220
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1417243 - 1417941 bp
Length : 699 bp
Strand : +
Note : -

DNA sequence : 
ATGAGTGAGTCGCGCATGAGTGATAAAGCCGTTCTGAGTTGCCGCAACCTGGGCAAGTCCTACGACGAGGGCCCGGAGTC
GGTGCAGGTGCTGTCCGGGCTCAACCTGGAACTGCAGGCCGGTGAGCGGGTGGCCATCGTTGGCAGTTCCGGCTCGGGCA
AGAGTACCTTGCTCAACCTGCTGGGCGGCCTCGACCGGCCGACCCAGGGTAGCGTGTGGCTGGCTGGCGAAGAGCTGTCG
GCACTGGGCGAGCGTGCCCGTGGCCTGCTACGCAACCGCGAGTTGGGCTTTGTCTACCAGTTCCACCACCTGCTGCCGGA
ATTCACCGCCATCGAGAACGTGTGCATGCCGCTGCTGATCGGCCGAACGCCCATCCCCGAGGCCCGGGAGCGTGCCGAGG
CGCTGCTCAAGCGGGTAGGCCTGGGCCACCGCCTGAACCACAAGCCGGCCGAGCTTTCCGGCGGCGAACGCCAGCGTGTG
GCGATTGCCCGGGCGCTGGTCAACCGCCCCGGCCTGGTGATGCTCGACGAGCCGACCGGTAACCTCGACCACCATACCGC
CCAAGGCATCCAGGAACTGATGCAGGAGCTGTCCAGCGCTTCGCGCACGGCATTCCTGGTGGTCACCCACGACCTCAACC
TGGCGCGGCAGATGGACCGTGTGCTGAAGCTCGACGATGGCCACCTGGTGGCCATCTGA

Protein sequence : 
MSESRMSDKAVLSCRNLGKSYDEGPESVQVLSGLNLELQAGERVAIVGSSGSGKSTLLNLLGGLDRPTQGSVWLAGEELS
ALGERARGLLRNRELGFVYQFHHLLPEFTAIENVCMPLLIGRTPIPEARERAEALLKRVGLGHRLNHKPAELSGGERQRV
AIARALVNRPGLVMLDEPTGNLDHHTAQGIQELMQELSSASRTAFLVVTHDLNLARQMDRVLKLDDGHLVAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-27 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-28 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
T1E_1230 YP_006531879.1 lipoprotein releasing system, ATP-binding protein NC_012469.1.7686878. Protein 2e-38 45
T1E_1230 YP_006531879.1 lipoprotein releasing system, ATP-binding protein NC_008702.1.4606598. Protein 2e-36 45