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Name : kdsB (T1E_1205) Accession : YP_006531854.1 Strain : Pseudomonas putida DOT-T1E Genome accession: NC_018220 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonate cytidylyltransferase Function : - COG functional category : - COG ID : - EC number : - Position : 1390734 - 1391498 bp Length : 765 bp Strand : - Note : - DNA sequence : ATGAGCCTGGAATTTACGGTAGTAATCCCCGCCCGGCTGCGCTCCACCCGCCTGCCAGGCAAACCGCTGCTGCTGATTGC CGGCAAGCCGATGGTGCAACATGTGTGGGAGCAGGCCCGCAAGAGCGGTGCCAGCCGTGTGGTCATCGCCACCGACGACA CCAGCATCCTCGAAGCCTGCCAGGCCTTCGGTGCCGAAGTGCTGATGACCCGTGCCGATCATGAATCGGGCACTGACCGC CTGGCCGAAGTGGCCGCGTACCTAGGGTTGCCGGCTGACGCCATTGTGGTCAACGTGCAGGGCGACGAGCCGCTGATCCC ACCGGTGATCATCGACCAGGTGGCGGCCAACCTGGCGGCGCATCCGGAAGCCGGTATCGCCACCCTGGCCGAGCCGATCC ATGAGCCGGAAACCGTGTTCAACCCGAACGCGGTCAAGGTGGTGAGTGACAAGAACGGCCTGGCCCTGACGTTCAGCCGA GCGCCGCTGCCCTGGGCCCGCGATACCTTTGCCAAGGCCCGCGACGTGCTGCCGGAAGGGGTACCCTATCGCCGTCATAT TGGCATGTACGCCTACCGTGTCGGCTTCCTGCACGACTTCGTCAGCTGGGGCCCATGCTGGCTCGAGCAGGCTGAAGCGC TGGAGCAGCTGCGTGCCCTGTGGCACGGCGTACGCATTCACATCGAGGATGCCATCGAGGCGCCTGCCGTGGGTGTCGAC ACCCCTGAGGATCTGGAGCGCGTACGGCGCTTGCTGGAGGCCTGA Protein sequence : MSLEFTVVIPARLRSTRLPGKPLLLIAGKPMVQHVWEQARKSGASRVVIATDDTSILEACQAFGAEVLMTRADHESGTDR LAEVAAYLGLPADAIVVNVQGDEPLIPPVIIDQVAANLAAHPEAGIATLAEPIHEPETVFNPNAVKVVSDKNGLALTFSR APLPWARDTFAKARDVLPEGVPYRRHIGMYAYRVGFLHDFVSWGPCWLEQAEALEQLRALWHGVRIHIEDAIEAPAVGVD TPEDLERVRRLLEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 2e-38 | 45 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 2e-38 | 45 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 1e-38 | 45 |
