Gene Information

Name : hels (USDA257_p01850)
Accession : YP_006529600.1
Strain :
Genome accession: NC_018191
Putative virulence/resistance : Unknown
Product : putative helicase Hels
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 162557 - 166060 bp
Length : 3504 bp
Strand : -
Note : -

DNA sequence :
TTGGAGACGATTGACGAACTGACCGCGTTCCTGGCGACCGCGACCGTCGACGGCGTCCTTGGGCGCCTGCTCTATCGCGG
TGCGGCGTGGTCGCTGATGCGCGAGAAGGGCGTGCTCCCACCGAACGCACCGCCCCTTGGCGCCACAATCGAAACCGATC
TCGCTGAACACGGCTTCGCCCTGCTTCGGGGCGCGATGGCTCTGCGTTCTCAGGCCGATTCGTCGGAATTGACCAGCAAG
GCCTTCGAGCGCGCCGCCAATGCCTTCGAAGCCCTGGTGCGCAACGGCGATCCGGAGTCACCCGATCGCGGTTTCCGTCG
CACCATCGCCGCGGCGGCCTATCACCTGGCCGGGTTCTCTGCGGTCGCTTACTCCCTCTTCAACGAGACCACGGACGACC
TCAACACCTCGCCGGGTGAAACGGCGATTCGACACCTGATCTTGCGCGATCTGGGTCAGCTGCGCGGCTTCGTTCGCGGA
TGGTTGGATGACGAGGCTCACGGCGATGAGCAGATCGCCGAGGCGCTGCGGGATGAAGAACCGGACGTCGACGAGGTGCT
GTCGACGATCCTCAACACAACGATCTGCCGAGCTTTGGCGCATTTTGACTTCGCACTCGAGACGGGCGAGCCTGAGCCGA
TCGAAAGCGCCCGGACCTTGCTCCGCACCGCGGTCAGCCTTGCGGACAACGCCGAGAACGTTCCGCTGTGGTGGATCTCG
AACCTCTGTCGCCACCTGATCGACGACCTCTGGCAGCATTCACTGCACCAGAACCTGCCAACCGAACCGCCAGAGGGTAC
AGAGGAAAAATATCCGGACCTGCGCCGGCTGTTCATCTCGTCGCTCTACGCGCGCAAGACATCCGAGGTGGAGCTATGGC
CATCGCAGCGCGAAGCGGCCCGACGTTCCACGGATGTCACCGACGATTTGGTCGTCGCCTTGCCGACCAGCGCGGGCAAG
ACCCGGGTGGCCGAGATTGCCGCGCTTATGACCCTGTCGTCGGCGCGCCGGGTGCTGATCGTCACGCCATTGCGCGCTTT
GTCGGCCCAGACCGAGCGCTCCTTCAGAAAGACCTTCGCGCCCCTCGGCTTCAGCGTCTCCTCCCTTTACGGCGCCAGCG
GACTTTCGGTCGGTGATGAAGACGCCCTGCGCACCCGCGAGATCATCATTGCAACGCCCGAGAAGCTCGACTTCGCGCTG
AGAAGCGACCCGTCGCTGATCGACGACGTCGGTCTGATCGTCCTCGACGAAGGTCACATGATCGGCCCGAGCGAGCGTGA
AATCCGCTACGAGACGCTGGTGCAGCGCCTGCTTCGGCGGGCGGATGCAGCAGACCGCCGGATTGTTTGTCTCTCCGCCA
TCCTGCCGAGCGGTGACGAATTGGACGATCTCACCGCCTGGATACGCTCCGACGAACCGGGTAAGCCGGTGCGTTCCGAC
TGGCGTCCCACACGACAGCGGTTCGGCGCGCTCACATGGCGAGGCAAGGACGCACTGCTCCGGCTCGACCTCGACGATGA
TGGTCCCTTTCTCGACAAATTTGTCGTGGAGAAACCAGCACGAGGAAAGGAGAAAAAGCCCTATCCGCGCAAGAATTCGC
ACCTCGCCCTGTTCGCGGCATGGGAATTTGCAAGCCAGGGCAAGCGGACCCTGATCTTCTCCACCCAGGCGAATTGGGTC
GAGAGCTACGGCAAACAGGCCATGGATCTCTGCAAGCGCGGCTATCTGCATTCCCTGTTGGAGGACGAAGCGTCGATCGC
CCGGGCCTTGGAGGTCGGCAAAGAATGGCTGGGCGAAGACCATCCCGCCGTCGCCTGCCTCAAGCAGGGCGTCGCCATCC
ACCACGGCCGGCTGCCAAGTCCATTCTTGCGCGAGTTGGAAGTCCTGCTGTCCGAGGGGGTACTGAAGGTCATCGTCGCT
TCGCCGACGCTCTCGCAGGGCCTCAATCTCAACGCCGCCGTACTGTTGGTGCCCGCACTGTATCGCGCCTCCGAGAAGAT
CAAAGGCGAGGAGTTCGCGAATGTCGCGGGCCGCGCCGGGCGTGCCTTCGTCGACGTCGAGGGGCTGATCGTTCATGTCA
TGTTCGACAAAATCGACTGGCGAAAAAGGGAATGGCGAAAGCTGGTCGCCTCCGCCAAGGCCCGCACACTGAAAAGCGGT
CTCATCCAGATCGTCGCCGAGATCCTCGAACGCCTGTCCCGCGAGGGTGTCCTGGATCGTGACGACGCCTGGGAATATCT
CGCCAACGCCCGCGAAGCCTGGAGATCGCCCGAGGAAGAAGCTGCGGTCGCAGAGCGCTTGGCCGCCGCCGTGGAGTATG
AGGCCAATGGCGACGACGATGAAGAGGGCGGCGATGACGAGGAAGAAACCATCGACGAGGAGCCGCTCTCGCAGATCGTC
GAACGCCTCGACGCGACCGTGTTCGGCCTGATCGAAGCGCTGGACGCCGATCGCGCGGATCTGCCGAAGCTCTTGGACGA
GGCGCTTAAGGGGTCCCTCTGGGCCCGCCAGATCGCCCGCGAGGACGAGGACATCGCCCCTTTGCACAAGAAGGTGTTTG
AGGCACGCGCCGACCTCATCTGGAAAAGCACCACGGCACAGACGCGACGCGGACATTTCGCCATGGGCGTTGGGCTTGAA
GCCGGTCTCTCAATCGACGCGATGGCTGATGAACTGGCTACACTGCTCGATCGGGCAGACGAGGCGGCGCTGAGAGGCGA
CATCGACGAACTCGTCGACGCCCTCTGCGGTCTCGGCGAACGGCTGCTGTTCATGCGGCCCTTCATCCCCGACAAGGCCA
ATGCGCTACCGGCGAATTGGAAGGCCATCCTGCATAGTTGGGTGTCAGGCGAGGACGTTGCCAAAATCGGACCTCAGAAC
ATGCGCGCAGTCGAAGAGGCCTTCACCTATCGCCTGGTCTGGGCGCTGGAAGCCGTGCGCACCCGCCGCATGTCCCTCGG
CTGGTCGCCAGAGACGGTTGCCGGCGGCGGCGCCGCGGCGGTTGAAACCGGCGTCCCGCAATTCATGATGGCGATGCTGA
TCCGTGCGGGCCTTCCATCACGGCGTGCGGCTATGGCGGCGATCAAAGATGCCCAACCTGTCTTCGTCACACCCGCTGAG
ATGCGGGTCTGGCTGGAATCCGACGAGATCACGGCCTACACCGACGCTGGCGACTGGCCGACACCTGATACCGCCGCATT
ATGGGCGCGCTTCCGAACGGAAGCACTCAGCGGCGGCATCCAGAAGTGGTCAGTTGAAAACTATAAACGCCTGCTCGACA
TCGCGGCCGCTCCTCCTGCCGGCCTCTATCGGATCGTCACCGACGAAGGTGATGGGCGCACCTGGCTGGCGACGCCAGAC
TACCAACGGCTTGCCCCGTTCAAAAAGTCGGCTGTCGATCCCAAGCCCAGCCTCTTCTGGGGTCGGTTGCCGGGCAACAC
CAGGCTTGTGGAAGCCTTACGCGTCGGCCGTGGTAAGCTGCGCTGGCCGCCGGCGAATGAGTAA

Protein sequence :
METIDELTAFLATATVDGVLGRLLYRGAAWSLMREKGVLPPNAPPLGATIETDLAEHGFALLRGAMALRSQADSSELTSK
AFERAANAFEALVRNGDPESPDRGFRRTIAAAAYHLAGFSAVAYSLFNETTDDLNTSPGETAIRHLILRDLGQLRGFVRG
WLDDEAHGDEQIAEALRDEEPDVDEVLSTILNTTICRALAHFDFALETGEPEPIESARTLLRTAVSLADNAENVPLWWIS
NLCRHLIDDLWQHSLHQNLPTEPPEGTEEKYPDLRRLFISSLYARKTSEVELWPSQREAARRSTDVTDDLVVALPTSAGK
TRVAEIAALMTLSSARRVLIVTPLRALSAQTERSFRKTFAPLGFSVSSLYGASGLSVGDEDALRTREIIIATPEKLDFAL
RSDPSLIDDVGLIVLDEGHMIGPSEREIRYETLVQRLLRRADAADRRIVCLSAILPSGDELDDLTAWIRSDEPGKPVRSD
WRPTRQRFGALTWRGKDALLRLDLDDDGPFLDKFVVEKPARGKEKKPYPRKNSHLALFAAWEFASQGKRTLIFSTQANWV
ESYGKQAMDLCKRGYLHSLLEDEASIARALEVGKEWLGEDHPAVACLKQGVAIHHGRLPSPFLRELEVLLSEGVLKVIVA
SPTLSQGLNLNAAVLLVPALYRASEKIKGEEFANVAGRAGRAFVDVEGLIVHVMFDKIDWRKREWRKLVASAKARTLKSG
LIQIVAEILERLSREGVLDRDDAWEYLANAREAWRSPEEEAAVAERLAAAVEYEANGDDDEEGGDDEEETIDEEPLSQIV
ERLDATVFGLIEALDADRADLPKLLDEALKGSLWARQIAREDEDIAPLHKKVFEARADLIWKSTTAQTRRGHFAMGVGLE
AGLSIDAMADELATLLDRADEAALRGDIDELVDALCGLGERLLFMRPFIPDKANALPANWKAILHSWVSGEDVAKIGPQN
MRAVEEAFTYRLVWALEAVRTRRMSLGWSPETVAGGGAAAVETGVPQFMMAMLIRAGLPSRRAAMAAIKDAQPVFVTPAE
MRVWLESDEITAYTDAGDWPTPDTAALWARFRTEALSGGIQKWSVENYKRLLDIAAAPPAGLYRIVTDEGDGRTWLATPD
YQRLAPFKKSAVDPKPSLFWGRLPGNTRLVEALRVGRGKLRWPPANE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP70293.1 helicase-like protein Not tested HPI Protein 4e-149 41