Gene Information

Name : USDA257_p01140 (USDA257_p01140)
Accession : YP_006529531.1
Strain :
Genome accession: NC_018191
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 93441 - 94160 bp
Length : 720 bp
Strand : +
Note : -

DNA sequence : 
GTGGAGAACGAGGCATCGGCCATCGCCCTGGAGGCGCGCGAACTCACCAAGATCTATCGGATGGGTGCGGTAGAAGTTCA
CGCCCTGCGCGGAGTGGACGTGGCCCTTCGCGAGGGCGAAGTGGTGGTGTTATTGGGGCCATCCGGCAGCGGCAAGTCGA
CCCTGCTCAATATACTTGGCGGCCTCGATACGCCGACTGGTGGAACGGTTAGGTTTCGCGGAGAGCCCCTCACTCTAGAT
AGCGAACGCGCACTCAACCTTTACCGTCGCAATCACGTCGGTTTCGTTTTCCAATTCTACAATCTCATCCCCAGCCTGAC
GGCGCGCGAAAACGTCTCCCTCGTGACGGAGATCGCCAGAAACCCAATGTCGCCTGTTGAAGCGCTTTCGATTGTCGGGC
TCGGCGACAGGCTTGATCACTTCCCCGCGCAACTTTCCGGCGGCGAGCAGCAGCGCGTTGCCATTGCCCGCGCAATCGCC
AAGCGCCCCGACTTGCTTCTCTGCGATGAGCCGACAGGCGCACTCGACAGCAAGACCGGAATCCTCGTGCTCGACGCGAT
CCTCAGGATCAATCGGGAACTCGGCACAACGACGGCGCTGATTACGCACAACGCAGTGATTGCCGAGATTGCCAATCGCG
TGCTCTACTTTGCCGACGGGCGCATCGTCGAAACGCGGACCAACGCCGCGCAGCGCGCCCCTGGCGAACTCGCCTGGTGA

Protein sequence : 
MENEASAIALEARELTKIYRMGAVEVHALRGVDVALREGEVVVLLGPSGSGKSTLLNILGGLDTPTGGTVRFRGEPLTLD
SERALNLYRRNHVGFVFQFYNLIPSLTARENVSLVTEIARNPMSPVEALSIVGLGDRLDHFPAQLSGGEQQRVAIARAIA
KRPDLLLCDEPTGALDSKTGILVLDAILRINRELGTTTALITHNAVIAEIANRVLYFADGRIVETRTNAAQRAPGELAW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-29 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 41
unnamed ABR13524.1 phosphite import ATP-binding protein Not tested PAGI-7 Protein 5e-17 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
USDA257_p01140 YP_006529531.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 1e-48 51
USDA257_p01140 YP_006529531.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 5e-28 45
USDA257_p01140 YP_006529531.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-37 42
USDA257_p01140 YP_006529531.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 6e-33 42