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Name : virD (USDA257_p04170) Accession : YP_006529289.1 Strain : Genome accession: NC_018180 Putative virulence/resistance : Virulence Product : type IV secretion system-coupling protein VirD Function : - COG functional category : - COG ID : - EC number : - Position : 4759 - 6678 bp Length : 1920 bp Strand : - Note : - DNA sequence : ATGGCACTGAAGGCAAAACCGCATCCGAGCCTGTTGCTCGTTCTGGTGCCCGTCGCCGTCACCGCCTTTGCCGTCTATGT CGTCGGCTGGCGCTGGCAGGCTCTTGCCGAAGGCATGTCGGGGAAAACGCAATACTGGTTCCTGCGGGTCTCGCCGGTGC CGGCGCTTTTGTTCGGGCCGCTCGCCGGCCTCTTGGCCGTTTGGGCCTTGCCATTGCACCGGCGAAGGCCGGTCGCGATG GCAGGCCTCGCCTGTTTTCTGACGGTCGCCGGCTTCTACGCGGTCCGTGAATTCGGCCGGCTCGCCCCATCCGTGGAGAG CGGCGCGCTATCATGGGACCGGGCACTGTCCTATCTCGACATGGTCGCTGTCGTCGGCGCGGTCGTAGGCTTCATCGCGG TGGCGATCGCCGCGCGTATTTCCACCGTCGTGTCCGAACCGGTGAAGCGCGCCAAGCTCGGAACCTTCGGGGACGCGGAC TGGCTGCCGATGTCGGCGGCGGGAAAGCTGTTTCCGCCGGACGGCGAGATCGTGGTCGGCGAGCGCTACCGCGTCGACAA GGACATCGTCCATGAACTGCCCTTCGATCCGAACGATCCTGCCGCATGGGGGAAAGGCGGCAAGACCCCGTTGCTGACCT ACCGCCAAGACTTCGATTCCACGCATATGCTCTTCTTTGCCGGGTCGGGTGGATACAAGACGACGAGCAATGTGGTGCCG ACGGCGCTGCGTTATACCGGGCCGCTGATCTGCCTCGATCCTTCCACCGAGGTCGCGCCCATGGTGGTCGAGCACCGAAC CCGCGTGCTCGGCCGCGAGGTGATGGTGCTTGATCCGACGAACCCGATCATGGGCTTCAACGTGCTCGATGGCATCGAGC ACTCACGGCAAAAGGAAGAGGACATCGTCGGCATTGCCCACATGCTTTTGTCGGAAAGTATACGCTTCGAAAGCTCGACC GGCTCCTATTTCCAAAACCAGGCGCACAATCTCCTGACCGGCCTGCTCACCCATGTGATGCTGTCGCCCGAATATGCCGG CCGGCGAAACTTACGCAGTCTCCGGCAGATCGTGTCCGAGCCGGAGCCCTCGGTGCTGGCGATGCTGCGCGACATTCAGG AGCATTCCGCGTCCGCGTTCATCCGCGAGACGCTCGGCGTCTTCACCAACATGACCGAGCAGACCTTCTCCGGCGTCTAT TCGACGGCGTCGAAAGACACACAATGGCTCTCGCTCGACAGCTACGCCGCGCTCGTCTGCGGTAATGCGTTCAAGTCGAG CGATATCGTCTCGGGCAACAAGGACGTGTTCCTCAACATCCCGGCATCGATCCTGCGCTCCTATCCGGGGATCGGCCGCG TCATCATCGGCTCGCTGATCAACGCCATGGTCCAGGCCGATGGCGGCTTCAAGCGCCGGGCGCTGTTCATGCTCGATGAG GTCGATCTCCTCGGCTACATGCGGGTACTCGAGGAGGCGCGCGATCGCGGCCGCAAGTACGGCATTTCCATGATGCTGAT GTACCAGTCGGTCGGCCAGTTGGAGCGGCATTTCGGGAAGGATGGCGCGACGTCGTGGATCGACGGCTGCGCCTTCGCCT CCTATGCCGCGATCAAGGCGCTCGACACGGCGCGCAATGTTTCGGCGCAGTGCGGCGAGATGACGGTGGAGGTGAAGGGA AGCTCCCGCAACATCGGCTGGGACACGAAGAACAGCGCATCGCGCAAATCCGAGAGCGTCAACTTCCAACGCCGGCCGCT GATCATGCCGCACGAGATCACCCAATCGATGCGAAAAGACGAGCAGATCATCATCGTTCAGGGCCACAGCCCGATCCGCT GCGGTCGGGCAATCTACTTCCGGCGGAAGGACATGAACGAGGCCGCGAAGGCCAATCGCTTCGTCAAGCCGATCCCGTGA Protein sequence : MALKAKPHPSLLLVLVPVAVTAFAVYVVGWRWQALAEGMSGKTQYWFLRVSPVPALLFGPLAGLLAVWALPLHRRRPVAM AGLACFLTVAGFYAVREFGRLAPSVESGALSWDRALSYLDMVAVVGAVVGFIAVAIAARISTVVSEPVKRAKLGTFGDAD WLPMSAAGKLFPPDGEIVVGERYRVDKDIVHELPFDPNDPAAWGKGGKTPLLTYRQDFDSTHMLFFAGSGGYKTTSNVVP TALRYTGPLICLDPSTEVAPMVVEHRTRVLGREVMVLDPTNPIMGFNVLDGIEHSRQKEEDIVGIAHMLLSESIRFESST GSYFQNQAHNLLTGLLTHVMLSPEYAGRRNLRSLRQIVSEPEPSVLAMLRDIQEHSASAFIRETLGVFTNMTEQTFSGVY STASKDTQWLSLDSYAALVCGNAFKSSDIVSGNKDVFLNIPASILRSYPGIGRVIIGSLINAMVQADGGFKRRALFMLDE VDLLGYMRVLEEARDRGRKYGISMMLMYQSVGQLERHFGKDGATSWIDGCAFASYAAIKALDTARNVSAQCGEMTVEVKG SSRNIGWDTKNSASRKSESVNFQRRPLIMPHEITQSMRKDEQIIIVQGHSPIRCGRAIYFRRKDMNEAAKANRFVKPIP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| virD4 | YP_001610010.1 | conjugal transfer coupling protein TraG | Not tested | Not named | Protein | 4e-158 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| virD | YP_006529289.1 | type IV secretion system-coupling protein VirD | VFG2242 | Protein | 2e-161 | 54 |
