Gene Information

Name : MROS_0539 (MROS_0539)
Accession : YP_006526795.1
Strain : Melioribacter roseus P3M-2
Genome accession: NC_018178
Putative virulence/resistance : Unknown
Product : Integrase catalytic region
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 609295 - 610167 bp
Length : 873 bp
Strand : +
Note : -

DNA sequence :
ATGTTCATAAAAGAGAACCGAAGGAATTATCCTTTAGAGTTAATGTGCCGGGTATTACGGGTCAGCCGCTCCGGGTATTA
TAATTGGCTAAAAAGGAAATTAAGTAGTAGAGAGATAGAAGAGCGGAAATTATTAGAGATAATAAGATTTCATTACAATA
GAAGCGATGGCAGGTATGGATCGCCAAGGATAACGGCGTCGATCAGAAGGAATGGAATAATTGTAAACAGGAAGAAAGTG
GCAAGGTTGATGAGGCTACACAATATACGAGCCAAGATGAAGAAGAGATACAAATCAACGACGCGTCAGAATCGAAAAGC
GGAGGTGAGCGAAAATTTGGTAAAAGGCAATTTTCGTTCGGAAGAGAAAGATAAGGTCTGGACGAGCGATATAACATATT
TGTGGACATCAGAAGGCTGGTTGTATTTGGCAGTGATAATGGATATTTACTCAAGAAAGATAGTGGGATGGTTGGTAAGT
CAGAGATTGACAGCTGAAATAATAAATAGAGCTTTAAGGATTGCCATAATGCATAGAAATCCGCCGGCGGGGTTAATTTT
TCACAGTGACAGAGGCAGTCAGTATACGAGCAAATCATTCAGAGAACAATTGAAAAGCTATCAGATGAAACAATCGATGA
GTTCGAGCGGCAATTGTTATGACAATGCAATTACGGAATCGTTTTTTCATACATTGAAAACCGAATTGGTGAATTTTGAG
AAATATGAAACGCGTGACGAAGCCAGGCAAAGTATATTTAGATACATTGAAATATTTTACAACAGGCAGAGATTACATTC
AGCTTTGGGTTATTTATCTCCGGTTGAATTCGAAGAAAAAAATAAGGAAGAAATTAAAGAAAGAGTTGCTTAA

Protein sequence :
MFIKENRRNYPLELMCRVLRVSRSGYYNWLKRKLSSREIEERKLLEIIRFHYNRSDGRYGSPRITASIRRNGIIVNRKKV
ARLMRLHNIRAKMKKRYKSTTRQNRKAEVSENLVKGNFRSEEKDKVWTSDITYLWTSEGWLYLAVIMDIYSRKIVGWLVS
QRLTAEIINRALRIAIMHRNPPAGLIFHSDRGSQYTSKSFREQLKSYQMKQSMSSSGNCYDNAITESFFHTLKTELVNFE
KYETRDEARQSIFRYIEIFYNRQRLHSALGYLSPVEFEEKNKEEIKERVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAF09022.1 unknown Not tested SHI-O Protein 1e-44 46
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 2e-44 46
unnamed AAF09030.1 unknown Not tested SHI-O Protein 2e-44 46
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 3e-44 46
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 2e-44 46
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 3e-44 46
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 2e-44 46
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 3e-44 46
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 4e-44 45
tnpB CAB61574.1 transposase B Not tested HPI Protein 8e-38 43
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 1e-37 42
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 1e-44 41
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 1e-44 41
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 1e-44 41
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 2e-45 41
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 7e-46 41
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 7e-46 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MROS_0539 YP_006526795.1 Integrase catalytic region VFG1706 Protein 1e-44 46