Gene Information

Name : MROS_2468 (MROS_2468)
Accession : YP_006528711.1
Strain : Melioribacter roseus P3M-2
Genome accession: NC_018178
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease ATP-binding subunit ClpC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2888424 - 2890985 bp
Length : 2562 bp
Strand : +
Note : -

DNA sequence :
ATGGAAGGAAATTTTTCAGAAAGGGTACAGGAAGTCATTCGATTAAGTCGAGAAGAAGCTCTCAGACTGGGTCATGATTA
TATAGGTACGGAACACCTTCTTCTGGGTATTATCCGGGAAGGACAGGGAGTTGCCGTCAAGATATTGAGAAATCTTGGCG
TCGACCTGGTTAAATTGAAAAAAGCCATTGAAGACACCGTCAGAACGTCGGGCGGAACTCTTACCATCGGCAATATACCG
CTTACCAAACAAGCCGAAAAAGTGCTCAAGATTACCCAGATTGAATCGAAGATTTACAAATCCGATGTAATAGGAACCGA
ACATATACTTCTTTCGCTCCTGAGAGACGAAGACAATATCGCTACTCAGATATTGCACCAGTTCAATGTTAATTACGACA
ATGTAAGAGCCGAATTGAACAATATTCTTTCGAGCAAAGAAAGCCAGAAAACATCCGCTCCGTTTGCTCAACCTTTTACG
GCAAAGAAAGTCGAGAAGACAAAAACGCCCGTGCTTGACAATTTCGGCAGGGACTTAACAAAACTTGCAATAGAAGACAA
ATTGGACCCTGTCATAGGAAGAGAAAAAGAGATTGAACGCGTTGCCCAGGTTTTGAGCCGAAGGAAAAAGAACAATCCCG
TTTTGATAGGGGAACCAGGAGTAGGAAAGACCGCAATAGCGGAAGGTTTGGCGCTCCGTATTGTTCAAAGGAAAGTGCCC
CGCATATTGCAGGACAAACGCGTCGTTACGCTAGATCTGGCGGGCTTGGTTGCGGGCACTAAATACCGCGGTCAATTCGA
AGAAAGAATGAAAGCATTGATGAACGAGCTCGAGAAAGCAGACGACGTGATATTATTTATCGACGAACTTCATACAATCG
TAGGCGCCGGCGGCGCATCCGGTTCTCTCGACGCTTCGAACATGTTCAAACCGGCATTGGCGCGCGGCGATATACAATGC
ATAGGAGCCACAACTTTAGACGAGTACAGAAAGTATATCGAAACCGACGGCGCGCTCGACAGAAGATTTCAGAAAGTGAT
GGTCGACCCGCCTTCTCCCGAAGAAACAATCGAAATCCTCGAGAACATTAAATTCAAGTACGAAGAACATCACCACGTAC
GATATTCGAGGGAAGCCATCGAAGCGGCTGTACGATTGAGCGAACGATACATTACGGACAGACATCTGCCCGATAAAGCT
ATCGACGTTATCGACGAAGCCGGTTCGAGAGTTCATATGGGTAATTTTACCGTATCGGAAGAAATACTGCGTCTAGAAGA
AGAAATTGAAAAAGTGAAATTACAGAAAATACAGGTCGTCAAACAGCAGGACTACGAAGAAGCTGCCCGATTGCGCGATA
AAGAACGTCAATTGCAATCGGACCTAGAAATTGCAAAACGCGAATGGGAAGCTAAAACCCAGGATATGGTCTACGACGTT
ACGGAAGAAGATATTGCCACTGTCGTTTCGATGATGACCGGAATTCCTACTACGAGAGTCGTTCAGGCCGAAAGCGAAAA
ACTTCTTAAAATGGAAGAAGCTCTCAAACAAAGAATCGTCGGTCAGGACGAAGCTGTTACAAAACTTGCCAAAGCAATTC
GAAGAACGCGAGCCGGTCTTAAAAGCGCTAACAGACCGATAGGTACCTTTATTTTCCTCGGACCGACCGGAGTCGGTAAG
ACTGAATTAGCCAAAGAACTTGCCCGTTATTTATTCGATACAGAAGACGCGCTTATACGTATCGATATGAGCGAGTATAT
GGAGAAATTTTCGGTATCCAGACTGGTCGGAGCTCCTCCGGGATATGTCGGCTACGAAGAAGGCGGTCAATTGACAGAAC
GCGTCAGAAGAAAACCGTACTCGGTTGTGCTTTTCGACGAAATTGAAAAAGCGCATCCCGACGTATTCAATATCCTCCTG
CAGGTTCTCGACGACGGGGTCTTAACAGACAGTCTCGGCAGAAGAGTCGACTTTAAGAATACGATTATTATTATGACGTC
GAATGTAGGTACGAAAGACATCAAAGTAACCGGCGGATTCGGTTTCGGCGACGTCACGGAAGCCGACGCATACACTACGT
TGAAAAACACAGTCGAAGACGCAATGAAAAAGCTCTTCAATCCTGAATTCCTTAACAGGATCGATGAAACCATCGTCTTC
AGAAGTCTCGACAAGGAAGACATCAAACAGATTATCAATATCGAAATGAAAGACCTGGTTAAGAATCTTCAGGAAAATAA
GATGACTATCGAATTGCACAAATCTGCCATTGAATTTCTGTCCGATAAAGGTTTTGACCCTAAATACGGCGCAAGGCCTT
TGAAACGCGCGATTCAAAAATATATCGAAGATCCGCTGGCTGAGGAATTACTGTTAGGTCAGTTCAAAGAAGGCGATAAA
ATAATCGTAAAACATAAAAAGAATACTGAAGAGCTTTATTTCGTTCCGGATAAAAAATCGCAGGACGAAAATGAAGAAGT
ACAGAACAAATCCGACGACGAAGTAAAAAATACGGATAAAGAAGAAGAAAACAGCGAAGAAAAGAACACAATTAATGAAT
AA

Protein sequence :
MEGNFSERVQEVIRLSREEALRLGHDYIGTEHLLLGIIREGQGVAVKILRNLGVDLVKLKKAIEDTVRTSGGTLTIGNIP
LTKQAEKVLKITQIESKIYKSDVIGTEHILLSLLRDEDNIATQILHQFNVNYDNVRAELNNILSSKESQKTSAPFAQPFT
AKKVEKTKTPVLDNFGRDLTKLAIEDKLDPVIGREKEIERVAQVLSRRKKNNPVLIGEPGVGKTAIAEGLALRIVQRKVP
RILQDKRVVTLDLAGLVAGTKYRGQFEERMKALMNELEKADDVILFIDELHTIVGAGGASGSLDASNMFKPALARGDIQC
IGATTLDEYRKYIETDGALDRRFQKVMVDPPSPEETIEILENIKFKYEEHHHVRYSREAIEAAVRLSERYITDRHLPDKA
IDVIDEAGSRVHMGNFTVSEEILRLEEEIEKVKLQKIQVVKQQDYEEAARLRDKERQLQSDLEIAKREWEAKTQDMVYDV
TEEDIATVVSMMTGIPTTRVVQAESEKLLKMEEALKQRIVGQDEAVTKLAKAIRRTRAGLKSANRPIGTFIFLGPTGVGK
TELAKELARYLFDTEDALIRIDMSEYMEKFSVSRLVGAPPGYVGYEEGGQLTERVRRKPYSVVLFDEIEKAHPDVFNILL
QVLDDGVLTDSLGRRVDFKNTIIIMTSNVGTKDIKVTGGFGFGDVTEADAYTTLKNTVEDAMKKLFNPEFLNRIDETIVF
RSLDKEDIKQIINIEMKDLVKNLQENKMTIELHKSAIEFLSDKGFDPKYGARPLKRAIQKYIEDPLAEELLLGQFKEGDK
IIVKHKKNTEELYFVPDKKSQDENEEVQNKSDDEVKNTDKEEENSEEKNTINE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MROS_2468 YP_006528711.1 ATP-dependent Clp protease ATP-binding subunit ClpC VFG0079 Protein 0.0 54
MROS_2468 YP_006528711.1 ATP-dependent Clp protease ATP-binding subunit ClpC VFG0080 Protein 3e-150 54