Gene Information

Name : xerD (PSJM300_04600)
Accession : YP_006523354.1
Strain : Pseudomonas stutzeri DSM 10701
Genome accession: NC_018177
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1018523 - 1019419 bp
Length : 897 bp
Strand : +
Note : COG4974 Site-specific recombinase XerD

DNA sequence :
ATGCCCGCCCTTGATGCCCCTGTAATTGACCGCTTCCTGGATGCCCTGTGGCTGCAGAAGGGGCTGTCGGATAATACCCG
CGATGCCTATCGCAGTGACCTGGCGCTGTTCAACGGCTGGCTGGCCGAACGCGACCTGAAGCTGGAGGACGCCGGCCGCG
CGATCATTCTCGATCACCTCGCCTGGCGCCAGGCCGGTGGCTACAAGGCGCGCTCCACCGCGCGCTTCCTTTCCGGTCTG
CGCAGCTTCTATCGGTTTCTGCTGAGTGAAGGGCTGATCGATGTCGATCCGACCCTGCAGGTCGACCTTCCTCGGCTGGG
GCGTCCCCTGCCCAAGGCATTGTCCGAGGCCGACGTGGAGGCCTTACTGGCGGCTCCGGATATTGGTGATCCCCTGGGGC
TGCGCGATCGGGCGATGCTGGAAGTGCTCTATGCCTGCGGGCTGCGGGTGACCGAGCTGATCTCGCTGAGTCTCGACCAG
ATCAATCTACGCCAGGGTGTGCTGCGAACGCTCGGCAAGGGTAACAAGGAACGTCTGGTGCCTCTGGGCGAGGAGGCCTT
GCACTGGCTCGAGCGCTACCTGCGTCAGGCCCGGGGCCTGTTGCTGGGCGACAAGCCGAGCGATGTCGTATTTCCCAGCC
AGCGTGGCACGCAGATGACCCGCCAGACGTTCTGGCACCGCATCAAGCTGCACGCCTCGATAGCCGGTATCGGTACGGCG
ATATCGCCGCATACGCTGCGCCATGCGTTCGCCACGCATCTGCTCAACCACGGCGCCGATCTGCGCACCGTGCAGATGCT
GCTGGGCCACAGCGACCTCTCGACCACCCAGATCTATACCCACGTCGCCCGTGCACGGCTGCAGGAGCTGCATGCGCGCC
ACCATCCGCGCGGCTGA

Protein sequence :
MPALDAPVIDRFLDALWLQKGLSDNTRDAYRSDLALFNGWLAERDLKLEDAGRAIILDHLAWRQAGGYKARSTARFLSGL
RSFYRFLLSEGLIDVDPTLQVDLPRLGRPLPKALSEADVEALLAAPDIGDPLGLRDRAMLEVLYACGLRVTELISLSLDQ
INLRQGVLRTLGKGNKERLVPLGEEALHWLERYLRQARGLLLGDKPSDVVFPSQRGTQMTRQTFWHRIKLHASIAGIGTA
ISPHTLRHAFATHLLNHGADLRTVQMLLGHSDLSTTQIYTHVARARLQELHARHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 7e-66 55
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 7e-66 55