Gene Information

Name : PSJM300_03955 (PSJM300_03955)
Accession : YP_006523227.1
Strain : Pseudomonas stutzeri DSM 10701
Genome accession: NC_018177
Putative virulence/resistance : Virulence
Product : type 4 prepilin peptidase PilD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 876489 - 877358 bp
Length : 870 bp
Strand : +
Note : COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases

DNA sequence : 
ATGACTCCTGTCGAATTTCTGGCCAGCAACCCGCTGGCCTTTGTTTTGTGCGCGCTGGTGCTTGGCCTGCTGGTCGGCAG
CTTCCTCAACGTAGTCATCCATCGCTTGCCGATCATGATGCAGCGTGATTGGCAATCGCAGGCGCGGGAGTTTCTCGAGT
TACCTGCCGAGCCTGCCGGCGCTGCCTTCAATCTGTTTCTCCCGCATTCACGTTGCCCCCACTGCGACCACCAGATCCGC
GCCTGGGAAAATATTCCGCTGATCAGCTGGCTGGCGCTGCGTGGCAAGTGTTCGGCGTGCAAGGCGTCGATCAGCAAGCG
CTACCCGCTGGTCGAGCTGGCGTGTGGGTTGCTCTCGGGTTACGTCGCCTGGCATTTCGGTTTTTCCTGGCAGGCTGGCG
CGATGCTGCTGCTGACCTGGGGTTTGCTGGCGATGAGCATGATCGATGTCGATCATCAGTTGCTGCCGGATTCGCTGGTG
CTGCCGCTGCTCTGGCTGGGCTTAATCATTAACAGCTTCGGACTGTTCGCTTCGCTGGAAGATGCGTTGTGGGGCGCAGT
TGTGGGTTACCTCGCCCTGTGGTCGGTGTACTGGCTGTTCAAGCTGGTGACCGGCAAGGAGGGGATGGGCTACGGCGACT
TCAAGCTGTTGGCCATGTTGGGCGCTTGGGGCGGCTGGCAGGTGCTGCCGCTGACTATCTTGCTGTCTTCGGTGGTCGGC
GCGGTGCTGGGCACCGTCATGCTGCGTATGCAGAAGGCCGAGAGCGGCACGCCCATTCCCTTCGGCCCCTATCTGGCGAT
CGCTGGCTGGGTCGCATTGCTTTGGGGGGACCAGATCACTGCCAGCTACCTGCAGTTCGCCAGACTGTAG

Protein sequence : 
MTPVEFLASNPLAFVLCALVLGLLVGSFLNVVIHRLPIMMQRDWQSQAREFLELPAEPAGAAFNLFLPHSRCPHCDHQIR
AWENIPLISWLALRGKCSACKASISKRYPLVELACGLLSGYVAWHFGFSWQAGAMLLLTWGLLAMSMIDVDHQLLPDSLV
LPLLWLGLIINSFGLFASLEDALWGAVVGYLALWSVYWLFKLVTGKEGMGYGDFKLLAMLGAWGGWQVLPLTILLSSVVG
AVLGTVMLRMQKAESGTPIPFGPYLAIAGWVALLWGDQITASYLQFARL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAE85237.1 putative prepilin peptidase A Not tested PAI V 536 Protein 5e-24 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSJM300_03955 YP_006523227.1 type 4 prepilin peptidase PilD VFG0114 Protein 8e-94 79
PSJM300_03955 YP_006523227.1 type 4 prepilin peptidase PilD VFG0234 Protein 7e-45 52
PSJM300_03955 YP_006523227.1 type 4 prepilin peptidase PilD VFG2428 Protein 8e-38 51
PSJM300_03955 YP_006523227.1 type 4 prepilin peptidase PilD VFG1882 Protein 2e-50 50