Gene Information

Name : PSJM300_03660 (PSJM300_03660)
Accession : YP_006523168.1
Strain : Pseudomonas stutzeri DSM 10701
Genome accession: NC_018177
Putative virulence/resistance : Virulence
Product : outer membrane receptor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 817896 - 820124 bp
Length : 2229 bp
Strand : -
Note : COG4771 Outer membrane receptor for ferrienterochelin and colicins

DNA sequence :
ATGTTCGCCCCCTTCGCCCGCACGGCCCTGGCCAGTGCCCTGGTTAGCTGCAGCTTCTACACGCTCGCCGACTCCAACCC
ACTGACGCTGAGCGACACCGTCGTCAGTGCCTCGGGCTTCGAGCAGAAGATCACGGAGGCACCGGCGAGCATCAGTGTGA
TCAGTCAGGAAGATTTGCAGCAGAAGCGCTACAACAACCTGGCTCAGGCCTTGGGTGATGTAGAAGGTATCGATATCGGC
CAAGGTACCGGCAAGACCGGCGGCCTGAATATCAGCATTCGCGGCATGGACAGCAAGTACTCGCTCATTCTGATCGACGG
TCGCCGGCAAAATGCTGCGGGTAACGTAACCCCCAACGGCTTTGGTGAGACCTCCACCAGCTTTATGCCGCCGCTCTCGG
CCATCGAGCGCATCGAAGTGATTCGCGGACCGATGTCTACCCTGTACGGCTCCGATGCCATGGGCGGTGTGATCAATATC
ATCACCAAGAAAGTTGCCAGCGAGTGGGGTGGTTCGATCACCCAAGACTACACCTATCAGGAAGACCGGGACTTCGGCGA
TACCCGCAACACCAGCCTCTACGCCAGTGGCCCGCTGATCGACGGTCTGCTGGGTCTGCAGGTACGCGGCAGCCTGTTCA
ATCGCGAAGAATCGGACCTGAGCTACGGCAGCGGCATCGAAGTCAGCAAGCGCGGCCCATCCCCGGTTGAGGGGCGCAAC
AGCAACATAGGCGCACGCCTGTCGTTCACCCCCCATGAAAACCACGATTTCGGCCTGGATGTGGAGCGTAGCCGGCAGGT
TTACAACAATGATGAATGCCAGCTCGGCACCCTTGATGGCTTGAATCGTAACTGCGATGCCGCCGCCACGACCGCCAACG
GTTATTCCGATGAACTGCGCTTCGAGCGCGAGCAAATCGCTCTGACTCACACTGCGCGCCTGGGCTTCGGCACGCTCGAT
TCAAGCCTGATGCACAACACTACCGAAACCTTTGGTCGGACGATTCCCGGCAATGTGATCGGTAATGATTCTGGTATTCC
TGGCACGCTGATCGGCGATGATCGCGAGCTGGAAACTACCAATCTGGTATTCGACACCAAGCTGGTAGCACCTATTGGTC
AATCCCATATCGCCACAATTGGTGGCCAATGGTGGAAAGCCGAGATGACCGACGGCATCGCTCTGGACGATTTTGAACAG
AAAACCTGGGCACTGTTTGCTGAAGACGAGTGGCGCCTGCGTGACGATCTGGCCCTGACCCTGGGTGCACGCTACGACGA
TCATGAAGCCTTTGGTGGTCATGTCAGCCCGCGCGCCTATCTGGTGTGGAACACAACTGAAAATTGGACGATGAAGGGTG
GTATCAGCCGTGGCTATCGCACCCCGGACCTGAACGAACTACACAGCGGCATCAACGGTGTCACCGGACAAGGCACCATC
ATCACCATCGGTAATCCAGATCTCGATCCGGAAACCACCACCAGCACCGAGTTTGGCGTCTACTACGACAACCTGGCTGG
TTTCAACGCCAATGCCACCCTATTCCATAACCAGTTCAAAGATAAGATCGCCAGTGGCGACCCGGTAGCCGATCCGCTCT
GCGCGGGTAATACCAGCGGTACTTGTTCACAGCAGATCAACGTTGACGAAGCGGTAACACAGGGCCTGGAACTGGCAGGC
AGCTGGGAGTTCGCACCGGCTTGGACACTCAGTGCCAACTACACCTACACCGACAGCGAACAGAAGAGTGGCGACAACAA
GGGCGAGCCCTTGACCAACACTCCTGAACACTTGGCCAACGCCAAGCTGAACTGGCAGACCACTGATCGCCTGAACCTGT
GGATGAAGACCGAATACCGTGGCGAGCGGGCGCGCTTCACTTCCAAATACGAAAACCTGGCCAACAGCAACGGAACCTAC
TCCACCAACCAGTCGATCTACGACACGCTGGGCAAGAACACCAAGGCCTACACCTTGCTCCATCTGGGTGGCTCTTTCCG
GGCGTCTGAGAACGTGACCTTCAACGCCGCTATCTACAACCTTCTCGACAAGGACTTTGTCGATGGCAAGGCATACAGCA
CCTACAGCTCGCCAAACAATGCCGGCGTTGGTGGTGGGGTAGTCAATGGCACCGCCTACGGCACCGACTTCTCTCACTCC
ACGGCAGGCACCACCGGAGTAATGGAAGAAGGCCGCCGCCTCTGGCTGTCTGCCAACATTACCTTCTGA

Protein sequence :
MFAPFARTALASALVSCSFYTLADSNPLTLSDTVVSASGFEQKITEAPASISVISQEDLQQKRYNNLAQALGDVEGIDIG
QGTGKTGGLNISIRGMDSKYSLILIDGRRQNAAGNVTPNGFGETSTSFMPPLSAIERIEVIRGPMSTLYGSDAMGGVINI
ITKKVASEWGGSITQDYTYQEDRDFGDTRNTSLYASGPLIDGLLGLQVRGSLFNREESDLSYGSGIEVSKRGPSPVEGRN
SNIGARLSFTPHENHDFGLDVERSRQVYNNDECQLGTLDGLNRNCDAAATTANGYSDELRFEREQIALTHTARLGFGTLD
SSLMHNTTETFGRTIPGNVIGNDSGIPGTLIGDDRELETTNLVFDTKLVAPIGQSHIATIGGQWWKAEMTDGIALDDFEQ
KTWALFAEDEWRLRDDLALTLGARYDDHEAFGGHVSPRAYLVWNTTENWTMKGGISRGYRTPDLNELHSGINGVTGQGTI
ITIGNPDLDPETTTSTEFGVYYDNLAGFNANATLFHNQFKDKIASGDPVADPLCAGNTSGTCSQQINVDEAVTQGLELAG
SWEFAPAWTLSANYTYTDSEQKSGDNKGEPLTNTPEHLANAKLNWQTTDRLNLWMKTEYRGERARFTSKYENLANSNGTY
STNQSIYDTLGKNTKAYTLLHLGGSFRASENVTFNAAIYNLLDKDFVDGKAYSTYSSPNNAGVGGGVVNGTAYGTDFSHS
TAGTTGVMEEGRRLWLSANITF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
r4 AAC61730.1 exogenous ferric siderophore receptor R4 Not tested PAI I CFT073 Protein 6e-127 45
unnamed CAC39288.1 hypothetical protein Not tested LPA Protein 2e-129 45
iha AAF36432.2 adhesin Virulence TAI Protein 3e-128 45
c3610 NP_755485.1 bifunctional enterobactin receptor/adhesin protein Not tested PAI I CFT073 Protein 7e-128 45
ECUMN_3356 YP_002414032.1 bifunctional enterobactin receptor/adhesin protein Virulence Not named Protein 7e-128 45
Z1178 NP_286713.1 bifunctional enterobactin receptor/adhesin protein Virulence TAI Protein 4e-128 45
Z1617 NP_287121.1 bifunctional enterobactin receptor/adhesin protein Not tested TAI Protein 4e-128 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSJM300_03660 YP_006523168.1 outer membrane receptor VFG1731 Protein 3e-128 45