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Name : PSJM300_03490 (PSJM300_03490) Accession : YP_006523134.1 Strain : Pseudomonas stutzeri DSM 10701 Genome accession: NC_018177 Putative virulence/resistance : Resistance Product : RND efflux transporter Function : - COG functional category : - COG ID : - EC number : - Position : 781253 - 784300 bp Length : 3048 bp Strand : - Note : COG0841 Cation/multidrug efflux pump DNA sequence : ATGGATGTAGCCCGTTACGCCATCTGCAAGCCGGTCAATATCTGGGTGTTGCTGCTGATCTGCCTGATCGGCGGCGCCGT CGCGTTCTTCGAGATGGGCCGCCTGGAAGACCCCGAATTCACCATCAAGGAGGCCATCGTCACGGTGCAATACCCCGGCG CGACCGCCATCGAGGTCGAGCAGGAAGTCACCGAGCCGTTGGAAAGCACCATCCAGGAGCTCGCCGAGATCAAGGAGATC CACTCGCGCTCGATGATCGGCCAGGCCGAAATCCGCGTGGAAATCCAGGACCGCTATACCGGCGATCTGCTCGCACAGAT CTGGGATAAGCTGCGCAACAAGCTCGACGATGCCCGACAGGAGTTGCCGCCAGGCATCGACCCGCCGTTGGTCAATGATG ATTTCGGCGACGTCTACGGAATTTTCTTCGCCCTGACCGGCGAAGGCTTGACCTTGCAGGAACTGCACGAAGTAGCCAAG GACCTGCGCCGCGGCCTGATCACGGCCGAAGGCGTCGGCCAGGTGGAGATCGCCGGGGTGCGCGAAGAGCGGATTCTGGT GGAAGTCGATCAGGCGCGCCTGGCCGCGCTGCGTCTGTCCCCGGAAGAACTGGTTGCGGCGCTCGGCGACGCCGATGCCG CGGTGGAGGCCGGCGGTGTGCGCGCAGGCGAGTTCTTCGTGCACATTCGCCCCACCGGCGCCTTCGAATCGCTGGATGCC CTGCGTGCGCTACCGGTCGGCCAGGGCCAGCAAAGCGTCGATCTGGGCTCCATCGCCACATTGAAACGCGAGTACGCCGA GCGTCCTGTCCAGATCATCCGCCATAACGGCGAGCCGGCGCTGACCCTCGGGATCAGCGGCATTTCCGGCAGCAATATCG TCGAGGTCGGTGACAGCGTCGAAGCGGCGTTGCAAGCCATGCAGCACCTGATGCCGCTGGGGGCCGAGCTGCATCCGCTC TACCAGCAGCACCGCATCGTCGACGACTCGGTCAACAGTTTCGCGCTCAATGTCTTTCTTTCGGTGGCCATCGTCGTCGG CGTGCTCTGCCTGGCGATGGGCCTGCGTGCCGGGGTGATCATCGGCGCGGTGCTGTTCCTGACGGTACTCGGCACGCTGC TGCTGATGTGGCTGGCCGGAATCGAGCTGGAGCGCATCTCCCTCGGGGCACTGATCATCGCCATGGGCATGCTGGTGGAC AACGCCGTGGTGATCTGCGACGGCATGCTGATCCAGAAGCAGCGTGGCATGAATATCCTCGACGCTTCACGCCAGACCTT GCAGCAGACGCAATGGCCGCTGCTCGGCGCGACCATCATCGGCATCCTGGCGTTCGCCGGCATTGGCCTCTCCCAGGACA CCACAGGTGAATTCCTGTTCTCGCTGTTCTTCGTCATCGCCGTCTCGTTGCTGCTGAGCTGGCTGCTGGCATTGCTGGTG GTGCCGCTGTTCGGTCACTACCTGTTGGAGTGCAAGGACGACAGGCAAGCGGACGAAGCCGACGAGGCCTACAGCGGCCC GATATACAACCGTTACCGACGCGTTGCCGGCGCGGTGCTCGCCCGGCCCTGGCTGACGCTGGGGGTGCTGGTGGTGCTCA CCGTGCTCAGCATGCTGGGCTTCAGCCGGGTCCCGCAGAGCTTCTTCCCGCCTTCGAGCACACCGCTGTTCTACGTCAAC CTGTTCCTGCCGCAGGGCACGCATATTCGCGAAACCAGCCGCACCGCCGAGGACGTCGAGGGTTATCTGAAGGGACTCGA GGGCGTCACCGAGGTGTCCACCTTCGTCGGGGCGGGCGCTTCGCGCTTCATGCTGACCTATGCGCCGGAGCAGCCCAACT CCTCGCTGATGCACTTTCTGGTGCGCACCGAAGACGCCGAGGTGATTGCCGAGCTGGTTGGGGAAGTGAATCAGACATTG CCGGGCCGTTACCCTTCTGCCGATGTCGCCGCCGCGCAATTCATGTTCGGCCCCAACGCCGAGGCCAAGCTCGAAGCACG CATCAGCGGTCCCGAGCTGGACGAACTGCGCCGGCTGTCCGCTGAAGGTCAGCGCATCCTTCAAGAACAGGGACAGGTTT TCAATATCCGCGACGACTGGCGCGCCCCGGTACCGGTGCTGCGCCCGCAACTGGATCTGGACCGCCTGGCCGATGCCGGT CTGACTCGCCAGCAGGTGGCGCAGGCTTTGGCGGCGGCCAGCGAAGGGCAGCAGGCAAGTGTGTTCCGTGACGGTGACGA GCTGATCCCGATCCTGCTCCGCGCCACACCCGAAGATCGCGTGGCGCCGGGCGACCTGTTGCAAAGGCTGATCTGGAGCC CGGCGACGGCTAGCTACGTGCCGCTTGCGCAGGTGGCCGATGGCATCGAGGCGACGTTCGAGGAATCGATGATTCGCCGC TACGGCCGTGAGCGCACCATCGCCATCCGCACCGAGCCACGCGACGGAGAAAACACCAACGTAGCCTTCCAGCGGATTCG TCCGCTGATCGAGGGCATCGAATTGCCGGTCGGTTACTCGCTGGAATGGGGCGGCGATCACGAACAGTCCTCCGACGCCC AGCAGGCGCTGGCCAGCACGCTGGCGCTGCCCTACCTGGCAATGGTCCTGGTCACGGTGCTGCTGTTCGCCAAGGTTCGC CAGCCGCTGATGATCTGGCTGGTAGTGCCCATGGCATTGTGCGGCGTCACCCTCGGCCTGCTGCTGACCGGTCAGCCATT CGGCTTCATGGCGCTGCTCGGGCTGCTCAGCCTGACCGGTATGCTGATCAAGAATGCCGTGGTGCTGGTGGACGAAATCG ACCGACAGATCGCCGACGAGGTCCCGCGGCTGACCGCCATCATCGAGGCCTCCGCTTCGCGCCTGCGGCCTGTGGTCATG GCCGCGGGCACCACGGTGCTGGGCATGGTGCCGCTGCTGTTCGATCCGTTTTTCGCCAACATGGCGGTGACCATCATGGG CGGGCTGGGTTTCGCCACGCTGCTCACCTTGCTGGCTGTGCCGTGTCTGTACCTGGTGTTCATGCGCGTCAAGCCGGAGG AAACCTGA Protein sequence : MDVARYAICKPVNIWVLLLICLIGGAVAFFEMGRLEDPEFTIKEAIVTVQYPGATAIEVEQEVTEPLESTIQELAEIKEI HSRSMIGQAEIRVEIQDRYTGDLLAQIWDKLRNKLDDARQELPPGIDPPLVNDDFGDVYGIFFALTGEGLTLQELHEVAK DLRRGLITAEGVGQVEIAGVREERILVEVDQARLAALRLSPEELVAALGDADAAVEAGGVRAGEFFVHIRPTGAFESLDA LRALPVGQGQQSVDLGSIATLKREYAERPVQIIRHNGEPALTLGISGISGSNIVEVGDSVEAALQAMQHLMPLGAELHPL YQQHRIVDDSVNSFALNVFLSVAIVVGVLCLAMGLRAGVIIGAVLFLTVLGTLLLMWLAGIELERISLGALIIAMGMLVD NAVVICDGMLIQKQRGMNILDASRQTLQQTQWPLLGATIIGILAFAGIGLSQDTTGEFLFSLFFVIAVSLLLSWLLALLV VPLFGHYLLECKDDRQADEADEAYSGPIYNRYRRVAGAVLARPWLTLGVLVVLTVLSMLGFSRVPQSFFPPSSTPLFYVN LFLPQGTHIRETSRTAEDVEGYLKGLEGVTEVSTFVGAGASRFMLTYAPEQPNSSLMHFLVRTEDAEVIAELVGEVNQTL PGRYPSADVAAAQFMFGPNAEAKLEARISGPELDELRRLSAEGQRILQEQGQVFNIRDDWRAPVPVLRPQLDLDRLADAG LTRQQVAQALAAASEGQQASVFRDGDELIPILLRATPEDRVAPGDLLQRLIWSPATASYVPLAQVADGIEATFEESMIRR YGRERTIAIRTEPRDGENTNVAFQRIRPLIEGIELPVGYSLEWGGDHEQSSDAQQALASTLALPYLAMVLVTVLLFAKVR QPLMIWLVVPMALCGVTLGLLLTGQPFGFMALLGLLSLTGMLIKNAVVLVDEIDRQIADEVPRLTAIIEASASRLRPVVM AAGTTVLGMVPLLFDPFFANMAVTIMGGLGFATLLTLLAVPCLYLVFMRVKPEET |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0395_A1355 | YP_001217299.1 | AcrB/AcrD/AcrF family transporter | Not tested | VPI-2 | Protein | 4e-157 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PSJM300_03490 | YP_006523134.1 | RND efflux transporter | BAC0428 | Protein | 4e-166 | 45 |
| PSJM300_03490 | YP_006523134.1 | RND efflux transporter | BAC0519 | Protein | 4e-165 | 44 |
| PSJM300_03490 | YP_006523134.1 | RND efflux transporter | BAC0526 | Protein | 4e-162 | 42 |
| PSJM300_03490 | YP_006523134.1 | RND efflux transporter | BAC0425 | Protein | 2e-157 | 41 |
