Gene Information

Name : PSJM300_03080 (PSJM300_03080)
Accession : YP_006523052.1
Strain : Pseudomonas stutzeri DSM 10701
Genome accession: NC_018177
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 692888 - 694363 bp
Length : 1476 bp
Strand : -
Note : COG3517 Uncharacterized protein conserved in bacteria

DNA sequence :
ATGACTACAACCGCAGCCGCCGTCGAAACCGGCAACCTCGCCGAAGCCGGCATCCTCGACCGCATCATCGCCGAAACCCG
CCTGACCCCGGATGACGAGGCCTACGACATCGCCAAGCGCGGCGTATCGGCCTTCATCGAGGAACTGCTCAAACCGCAGA
ATGAAAACGAGCCGGTGAAGAAGGCGATGGTCGATCGAATGATCGCCGAGATCGACGCCAAGCTCAGCCGGCAGATGGAC
GAGATTCTCCACCACCCCGAGTTCCAGGCGCTGGAATCCTCCTGGCGCGGCCTCAAACTGCTGGTGGACCGCACCAATTT
CCGCGAGAACATCAAGCTGGAGATCCTCAACGCCTCCAAGCAGGACCTGCTGGAAGACTTCGAGGACAGCCCGGAGATCG
TCCAGTCCGGCCTCTACAAGCACATCTATACCGCCGAGTATGGCCAGTTCGGCGGCCAGCCGGTAGGCGCCCTGATCGCC
AACTATTTCTTTGACCCGAGCGCACCCGACGTCAAGACCCTGCAGTATGTGGCCAGCGTCGCCAGCATGTCCCACGCGCC
CTTCGTCGCGGCAGCCGGGCCGAAATTCTTCGGCCTGGAAAGCTTCACCGGGCTGCCTGACCTGAAGGATCTCAAGGATC
ACTTCGAAGGCCCGCAATTCGCCAAGTGGCAGAGCTTCCGCGAGCAGGAAGATGCCCGCTACGTGGGTCTCACCGTTCCG
CGCTTCCTGCTGCGCAACCCCTATGACCCCGAAGACAACCCGGTCAAAAGCTTCGTCTACAAGGAAAACGTCGCCAACAG
CCACGAGCATTATCTCTGGGGCAACACCGCCTATACCTTCGCCAGCCGCCTGACCGACAGCTTCGCCAAGTTCCGCTGGT
GTCCGAACATCATCGGCCCGCAGAGCGGTGGCGCGGTGGAAGACCTGCCGCTGCATCATTTCGAAAGCATGGGCGAGATC
GAGACCAAGATTCCCACCGAAGTGCTGGTATCCGACCGTCGCGAGTACGAGCTGGCCGAAGAAGGCTTCATCGCCCTGAC
CATGCGCAAAGGCAGCGACAACGCTGCATTCTTCTCCGCCAACTCGGCGCAGAAGCCGAAGTTCTTCGGCAACAGCGAGG
AAGGCAAGACCGCCGAACTGAACTACAAGCTCGGCACCCAGCTGCCCTACCTGTTCATCGTCAACCGCCTGGCACACTAC
CTGAAGGTGCTGCAGCGCGAGCAGATCGGCGCCTGGAAGGAGCGCACCGACCTGGAGCTGGAGCTGAACAAGTGGATTCG
CCAGTTCGTTGCCGACCAGGAGAACCCCAGCGCCGAAGTGCGCAGCCGTCGCCCGTTGCGCGCCGCCCAGGTCAACGTCA
GCGACGTGGAAGGCGAGCCGGGCTGGTACCGCGTCAGCCTGAGCGTCCGGCCGCACTTCAAGTACATGGGTGCCGACTTC
ACCCTGTCGCTGGTCGGCAAGCTGGATAAAGAGTGA

Protein sequence :
MTTTAAAVETGNLAEAGILDRIIAETRLTPDDEAYDIAKRGVSAFIEELLKPQNENEPVKKAMVDRMIAEIDAKLSRQMD
EILHHPEFQALESSWRGLKLLVDRTNFRENIKLEILNASKQDLLEDFEDSPEIVQSGLYKHIYTAEYGQFGGQPVGALIA
NYFFDPSAPDVKTLQYVASVASMSHAPFVAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFREQEDARYVGLTVP
RFLLRNPYDPEDNPVKSFVYKENVANSHEHYLWGNTAYTFASRLTDSFAKFRWCPNIIGPQSGGAVEDLPLHHFESMGEI
ETKIPTEVLVSDRREYELAEEGFIALTMRKGSDNAAFFSANSAQKPKFFGNSEEGKTAELNYKLGTQLPYLFIVNRLAHY
LKVLQREQIGAWKERTDLELELNKWIRQFVADQENPSAEVRSRRPLRAAQVNVSDVEGEPGWYRVSLSVRPHFKYMGADF
TLSLVGKLDKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 5e-162 63
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 3e-162 63
HH0247 NP_859778.1 hypothetical protein Not tested HHGI1 Protein 5e-155 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSJM300_03080 YP_006523052.1 hypothetical protein VFG2093 Protein 2e-180 71
PSJM300_03080 YP_006523052.1 hypothetical protein VFG2475 Protein 6e-169 67