Gene Information

Name : PSJM300_03055 (PSJM300_03055)
Accession : YP_006523047.1
Strain : Pseudomonas stutzeri DSM 10701
Genome accession: NC_018177
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 686681 - 689260 bp
Length : 2580 bp
Strand : -
Note : COG0542 ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
ATGATCAACGTCGATTTGCAACAGCTGGTACAGGCGCTGGATGCCGAAACCCGCCGTGACCTGGAAAACGCAGCCGAGCG
CTGCGTCGTACGAGGGGGCAGCAAGGTGCTGGTGGAGGACCTGCTGCTCGGCCTGCTGGAGCGCAGCGATGGTCTGCTGG
TGCGGGCCTTGCAGGATGCAGCTGTCGATGCGGGCGAACTGGCCCAGGCGCTGCAGCCCCAGGGCGAGAATAGCGAATCG
CGCAACCCGGTATTTTCCAGCGAGCTGGTGCAATGGCTGCAGGACGCCCTGCTGGCAGCGAGCCTCGAGCTCGGCCAAAG
CCACGTGGACCAGGCGGCGCTGATTCTGGCTTTGCTGCGCAATCCCCTGCGCTATGCCGGCAGCCATTACCAGCCACTGT
TAGCGAAACTCAATGCCGAACGCCTGCGCGAATTCGCTCTGGCCCAACAGCCACAACAAGCTGGCCAGCCGGCCGCACCG
GGCGATACCAACCTCCAGCGCTTCACCCACAACTTCACCCAGCAAGCCCGCGACGGCAAGCTTGACCCGGTACTCTGCCG
CGATGCGGCGATCCGCCAGATGATCGACATCCTCGCCCGCCGGCGCAAGAACAACCCCATCGTGGTCGGCGAGGCAGGTG
TCGGCAAGACCGCCATCGTCGAAGGGCTGGCACTGCGCATCGCCCATGGCGAGGTGCCCGATGCGTTGAAGGGCGTCGAA
CTGCTGTGCCTCGACCTCGGCCTGCTGCAAGCAGGTGCCAGCGTTAAGGGCGAGTTCGAGCGTCGTCTTCAGGGCGTGAT
CGATGAAGTAAAGAACTCGCCGAAGCCCATCATCCTTTTCATCGACGAAGCCCATACCCTGATCGGCGCTGGCGGCCAGG
CCGGCAGCGGAGATGCCGCCAACCTGCTCAAGCCGGCTCTCGCACGTGGCGAGCTCCGTACCATCGCCGCAACGACCTGG
AGCGAGTACAAGAAATACTTCGAGAAAGACCCTGCGCTGGCGCGGCGCTTTCAGCCCGTGCAACTGCATGAACCGAGCGT
CGACGAAGCCATCACCATCCTCCGCGGCCTGGCGCCGGTCTATGAAAAGAGTCACGGCATCTATCTGCGCGACGACGCGG
TGGTCGCCGCGGCCGAGCTATCCGCACGCTATCTGGCCGGACGCCAGCTGCCGGACAAAGCCGTGGACGTGCTTGATACA
GCCTGCGCACGGGTGCGCATCAGCCTCGCGGCCGCGCCCGAGGTATTGGAACGTCTGAGAAACGAAATCGCCGAGGGCGA
ACGCCAGCATAAGGCGCTGGAGCGCGACCAGGAGGCCGGGCTGCCAATCGACACGCAGAATCTGGATCGCCTCTACGCTC
GTCTGGCCAAAGCACAAACCGAACTGGAGCAGATCGAAACACGCTGGACCGAGCAACGTGAACTGGCCGAGCGAATGCTC
GAGCTGCGCAGACAGTGCGCAGCCGCACGCGTGGACGACGAACGGGTGACGTGCCTGGAAGAACTCGAAGCCGATCTGCG
AGCGCTCCAGGCACGGCTGGCTGCAGCGCAGGCACAGGAACGGCTGGTTAGCCACGAAGTCTGCCCCCGCCTGGTCGCCG
AGGTGATCAGTCACTGGACCGGTGTGCCGCTGTCGCAGCTGGCGCGCGAGCACAACAGCAAGGTGATCACCTTCGCCAGC
GATCTCGGCAACCGCGTTCGCGGACAGAAGCAGGCGGTCGAAGCGCTCGACCGGGCCATGCGCGCCACGGCTGCCGGCCT
GAACAAACCCGACGCGCCGGTAGGCGTCTTCCTGCTGGTCGGCCCCAGCGGCGTCGGCAAGACGGAAACCGCGCTGGCAC
TGGCGGACTTGCTGTATGGCGGCGAGCGCTTCCTGACCACCATCAACATGTCCGAATTCCAGGAAAAGCACAGCGTTTCA
CGACTGATCGGCGCCCCACCGGGCTATGTCGGCTACGGCGAAGGCGGCATGCTCACCGAAGCCGTGCGCCAGAAACCCTA
TTCCGTGATCCTGCTGGATGAAGTCGAAAAAGCCGACCCGGAAGTGATGAATGTCTTCTATCAGGTCTTCGACAAGGGCG
TGGCCAACGATGGCGAAGGTCGCGAGATCAATTTCCGCAACACGCTGATCCTGATGACGTCGAATCTCGCCAGCGATCGC
ATCGAGAGCCTGTGTGCCGATGGCCAGCGACCCGAGGTGAGCACGCTCGAGCAAGCCATTCGCCCGAAATTGACCCAGCA
TTTCAAACCAGCATTGCTGGCACGCATGCGCGTGGTGCCGTACTACCCGGTCAATGGCGAGGTGCTGAACGAACTGGTGG
CGCTGAAGCTCGCGCGTTTTGGCGAACGCCTGGCTCGACGCCAGTTGCAATTCAGTTACTCGCAGGCACTGCTCGAGCAC
CTCTCTCAACGTTGCGACAACGGTAACAGCGGCGCCCGCCTGATTGATCAGCTGATCGACCAGCACCTGCAGCCACTGGT
AGTGGATCGTCTGCTCGATGCCATGGCCGGTGGCGAACCCCTGCAGCGGGTACATGCGACACTCGATGGCGAAGGAGCTG
TGATCTGTGAGTTCGCTTGA

Protein sequence :
MINVDLQQLVQALDAETRRDLENAAERCVVRGGSKVLVEDLLLGLLERSDGLLVRALQDAAVDAGELAQALQPQGENSES
RNPVFSSELVQWLQDALLAASLELGQSHVDQAALILALLRNPLRYAGSHYQPLLAKLNAERLREFALAQQPQQAGQPAAP
GDTNLQRFTHNFTQQARDGKLDPVLCRDAAIRQMIDILARRRKNNPIVVGEAGVGKTAIVEGLALRIAHGEVPDALKGVE
LLCLDLGLLQAGASVKGEFERRLQGVIDEVKNSPKPIILFIDEAHTLIGAGGQAGSGDAANLLKPALARGELRTIAATTW
SEYKKYFEKDPALARRFQPVQLHEPSVDEAITILRGLAPVYEKSHGIYLRDDAVVAAAELSARYLAGRQLPDKAVDVLDT
ACARVRISLAAAPEVLERLRNEIAEGERQHKALERDQEAGLPIDTQNLDRLYARLAKAQTELEQIETRWTEQRELAERML
ELRRQCAAARVDDERVTCLEELEADLRALQARLAAAQAQERLVSHEVCPRLVAEVISHWTGVPLSQLAREHNSKVITFAS
DLGNRVRGQKQAVEALDRAMRATAAGLNKPDAPVGVFLLVGPSGVGKTETALALADLLYGGERFLTTINMSEFQEKHSVS
RLIGAPPGYVGYGEGGMLTEAVRQKPYSVILLDEVEKADPEVMNVFYQVFDKGVANDGEGREINFRNTLILMTSNLASDR
IESLCADGQRPEVSTLEQAIRPKLTQHFKPALLARMRVVPYYPVNGEVLNELVALKLARFGERLARRQLQFSYSQALLEH
LSQRCDNGNSGARLIDQLIDQHLQPLVVDRLLDAMAGGEPLQRVHATLDGEGAVICEFA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-124 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSJM300_03055 YP_006523047.1 ATPase VFG2084 Protein 2e-146 48