Gene Information

Name : PSJM300_02530 (PSJM300_02530)
Accession : YP_006522942.1
Strain : Pseudomonas stutzeri DSM 10701
Genome accession: NC_018177
Putative virulence/resistance : Virulence
Product : alginate biosynthesis regulatory protein AlgR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 561458 - 562204 bp
Length : 747 bp
Strand : +
Note : COG3279 Response regulator of the LytR/AlgR family

DNA sequence :
ATGAATGTGCTGATTGTCGATGACGAACCTCTAGCCCGCGAGCGCCTCGGCCGACTGGTAGGTGAGCTTGACGGCTATCG
TGTCCTGGAACCTTCCGCCAGCAATGGCGAAGAGGCCCTCTCCCTGATCGAGGAGCTGCGGCCCGATATCGTCTTGCTGG
ATATCCGTATGCCCGGCCTGGACGGATTGCAGGTTGCCGCCAAGCTCTGTGAGCGGGACGCGCCGCCCGCGGTGATCTTC
TGCACCGCCCATGATGAATTCGCGGTCGAAGCCTTCCAGGTCAGCGCGGTCGGCTATCTGGTCAAGCCGGTCCGGCTGGA
ACACCTCAGCGAGGCGTTGAAGAAGGCCGAGCGCCCGAACCGCGTGCAACTGGCGGCGCTGACCCGTCCTGCGGCGGTCA
GCGGTGCCGGGCCGCGCAGCCATATCAGTGCGCGCACCCGCAAAGGCATCGAACTGATTCCGCTGGATCAGGTGATCTAT
TTCATCGCCGATCACAAGTACGTGACGCTGCGCCACGAATCCGGCGAGGTGCTGCTGGACGAGCCGCTGAAGGCGTTGGA
GGAGGAGTTCGGCGAGCGTTTCGTGCGGGTGCATCGCAACGCGCTGGTCTACCGTGACCGTATCGAACGCCTGCAACGTA
CGCCGCTGGGGCACTTCCAACTGCACCTGAAGGGGCTCGAAGGCGAGCCGCTGACGGTCAGCCGACGGCATGTCGCGGGG
GTCCGCAAGTTGATGCAGAGCCTCTGA

Protein sequence :
MNVLIVDDEPLARERLGRLVGELDGYRVLEPSASNGEEALSLIEELRPDIVLLDIRMPGLDGLQVAAKLCERDAPPAVIF
CTAHDEFAVEAFQVSAVGYLVKPVRLEHLSEALKKAERPNRVQLAALTRPAAVSGAGPRSHISARTRKGIELIPLDQVIY
FIADHKYVTLRHESGEVLLDEPLKALEEEFGERFVRVHRNALVYRDRIERLQRTPLGHFQLHLKGLEGEPLTVSRRHVAG
VRKLMQSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00326 YP_008207791.1 Response regulator of the LytR/AlgR family Not tested AbaR25 Protein 9e-51 44
BJAB0868_00330 YP_008211656.1 Response regulator of the LytR/AlgR family Not tested AbaR26 Protein 9e-51 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSJM300_02530 YP_006522942.1 alginate biosynthesis regulatory protein AlgR VFG0119 Protein 3e-105 87