Gene Information

Name : PSJM300_18690 (PSJM300_18690)
Accession : YP_006526149.1
Strain : Pseudomonas stutzeri DSM 10701
Genome accession: NC_018177
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4049705 - 4051198 bp
Length : 1494 bp
Strand : -
Note : COG1012 NAD-dependent aldehyde dehydrogenases

DNA sequence :
ATGACCGCCCTGACTTTCGCCGACTGGCAACAGCGCGCCCGCGACCTGCACATCGAAGGCCGGGCCTTCATCCAGGGTGA
ATACAGCGCGTCCGCCGCCGGCGCCGACTTCGATTGCATCAGCCCGGTCGACGGTCGGGTGCTGGCCCAGGTGGCCAGCT
GCGACGAGGCCGACGCCGACCGTGCGGTGCTCAGTGCGCGCATGGCCTTCGAGTCGGGCGCCTGGTCGCGGCTGGCACCG
GCCAAACGCAAGGCGGTGATGATCCGTTTTGCCGATCTGCTCGAAGCCAATGCCCAGGAGCTGGCGCTGCTGGAAACACT
CGACATGGGCAAGCCGATCAGCGATGCCCTGGCGGTGGATGTGCCGGGCGCTGCACGGGCGCTGCGCTGGTCCGGTGAGG
CGATCGACAAGATCTACGACGAGGTGGCCGCCACGCCCCACGATCAGCTGGGCCTGGTCACGCGCGAGCCGGTCGGCGTG
GTGGCGGCCATCGTGCCGTGGAACTTCCCGCTGATGATGGCCTGCTGGAAACTCGGCCCGGCGCTGGCCACGGGCAACTC
GGTGGTACTCAAGCCCTCGGAGAAATCGCCGCTGAGCGCCATTCGCATGGCGCAGCTGGCCATCGAAGCCGGCATTCCGC
CGGGCGTGCTCAACGTGTTGCCGGGCTACGGGCACACCGTGGGCAAGGCGCTGGCGCTGCACATGGATGTCGACACCCTG
GTATTCACCGGCTCCACGCGGGTCGCCAAGCAGCTGATGATCTATGCCGGCGAGTCGAACATGAAGCGGGTCTGGCTGGA
GGCGGGCGGCAAGAGCCCGAACATCGTTTTCGCCGATGCGCCGGATCTCAAGGCCGCGGCGGAGGCGGCCGCCAGCGCCA
TCGCTTTCAACCAGGGCGAAGTCTGCACCGCCGGTTCGCGGCTGCTGGTGGAAGGTTCGATCAAGGCGCGCTTCCTGCCC
ATGGTGGTCGAGGCGCTCAAGGGCTGGAAGCCGGGCAACCCGCTGGACCCGGCGACCAACGTCGGCGCGCTGGTCGACAC
CCAGCAGCTCGATACCGTGCTCGGCTACATCGAGGCGGGCCGCAACGACGGCGCCCAGGTGCTCATCGGCGGCCAGCGGA
CACTGGAGGAGAGCGGCGGGTTGTATGTGGAGCCGACCATCTTCGATGGCGTGAGCAACGCGATGAAGATCGCCCAGGAG
GAAATCTTCGGCCCGGTGCTGTCGGTCATCACCTTCGATACGCCGCAGGAAGCCGTCACCATCGCCAACGACACCCCCTA
TGGCCTGGCCGCCGCGGTCTGGACCGCCGACCTGTCCAAGGCGCACCTGACGGCCAGGGCGCTGCGGGCGGGCAGCGTCT
GGGTCAATCAGTACGACGGCGGCGACATGACCGCGCCCTTCGGTGGCTTCAAGCAGTCGGGCAATGGCCGCGACAAGTCG
CTGCATGCCTTCGACAAGTACACGGAGCTGAAGGCGACCTGGATAAAGCTGTGA

Protein sequence :
MTALTFADWQQRARDLHIEGRAFIQGEYSASAAGADFDCISPVDGRVLAQVASCDEADADRAVLSARMAFESGAWSRLAP
AKRKAVMIRFADLLEANAQELALLETLDMGKPISDALAVDVPGAARALRWSGEAIDKIYDEVAATPHDQLGLVTREPVGV
VAAIVPWNFPLMMACWKLGPALATGNSVVLKPSEKSPLSAIRMAQLAIEAGIPPGVLNVLPGYGHTVGKALALHMDVDTL
VFTGSTRVAKQLMIYAGESNMKRVWLEAGGKSPNIVFADAPDLKAAAEAAASAIAFNQGEVCTAGSRLLVEGSIKARFLP
MVVEALKGWKPGNPLDPATNVGALVDTQQLDTVLGYIEAGRNDGAQVLIGGQRTLEESGGLYVEPTIFDGVSNAMKIAQE
EIFGPVLSVITFDTPQEAVTIANDTPYGLAAAVWTADLSKAHLTARALRAGSVWVNQYDGGDMTAPFGGFKQSGNGRDKS
LHAFDKYTELKATWIKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 1e-120 58
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-72 42
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 6e-73 42
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 4e-73 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 4e-73 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 4e-73 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSJM300_18690 YP_006526149.1 aldehyde dehydrogenase family protein VFG0082 Protein 4e-73 42