Gene Information

Name : PSJM300_18465 (PSJM300_18465)
Accession : YP_006526104.1
Strain : Pseudomonas stutzeri DSM 10701
Genome accession: NC_018177
Putative virulence/resistance : Unknown
Product : S1 RNA-binding domain-containing protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3990883 - 3993195 bp
Length : 2313 bp
Strand : +
Note : COG2183 Transcriptional accessory protein

DNA sequence :
ATGGACAGCATCAATTCCCGCATCGCCAACGAGCTGGGCGTGCGCCCGCAACAGGTAGCCGCCGCCGTGGCGCTGCTCGA
CGAAGGCTCCACCGTGCCCTTCATCGCCCGTTACCGCAAGGAAGTCACCGGCAGCCTCGACGATACCCAGCTGCGCAATC
TGGAAGAGCGCCTGCGCTACCTGCGCGAGCTGGACGAGCGCCGCGCCTCGATCCTCGCCAGCATCGAGGAGCAGGGCAAA
CTCACCCCCGAGCTCGCCCGCGAGATCAACCTGGCCGACACCAAGACCCGTCTCGAAGACCTCTACCTGCCCTACAAGCA
GAAGCGCCGCACCAAGGGCCAGATCGCCCTGGAAGCCGGCCTCGGCGAGCTGGCCGATGCGCTGTTCGCCGACCCGAGCC
TGACGCCCGAAACCGAAGCCGAACGCTTCATCGATGCCGAGAAGGGCTTCGCCGACACCAAGGCCGTGCTCGAAGGTGCC
AAGTACATCCTCATGGAGCGCTTCGCCGAGGACGCCGACCTGCTGGCGAAACTGCGCGATTTCCTCAAGCACAACGCCAC
TTTCAGCGCCCGCGTCGTACCCGGCAAGGAGAACGAAGGCGCCAAGTTCAGCGATTATTTCGAGCACGACGAGATCCTCA
AGAACACCCCGTCGCACCGCGCCCTGGCGATCTTCCGCGGCCGCAACGAGGGCATTCTGAGCATCGCCCTCAAGGTCGGT
GACGAGGCGCCGGGCAGCATGCACCCGGGCGAGACGATGATCGGCGAGCGCTTCGGCATCGACAATCGCGGTCGCGCCGC
CGACAAGTGGCTGGGCGAAGTGGTGCGCTGGACCTGGAAGGTCAAGCTCTACACCCACCTGGAAACCGACCTGCTCGGCG
AGCTGCGCGACAAGGCCGAGGACGAGGCCATCTCGGTGTTCGCCCGCAACCTCCACGACCTGCTGCTGGCTGCCCCGGCC
GGCCCGCGCGCGACCCTGGCGCTGGACCCCGGCCTGCGCACCGGCTGCAAGGTGGCGGTGGTCGACGCCACCGGCAAGCT
GCTGGATACCGCCACCGTCTACCCACATGCGCCGCGCAACGACTGGGACGGCACCCTGGCCATCCTCGCCAGGCTCTGCG
CCAAGCACGGCGTGGACCTGATCGCCATCGGCAACGGCACCGCCAGCCGCGAGACCGACAAGCTGGCCGGCGAGCTGATC
AAGAAAGTGCCGGGCCTGAAGCTCACCAAGATCATGGTCAGCGAGGCCGGCGCCTCGGTGTATTCGGCCTCGGAACTGGC
CGCGAAGGAATTCCCCGATCTGGACGTGTCGCTGCGCGGCGCGGTGTCCATCGCCCGCCGCCTGCAGGACCCGCTGGCCG
AGCTGGTGAAGATCGAGCCCAAGGCCATCGGCGTCGGCCAGTACCAGCACGATGTCTCCCAGCTCAAGCTGGCACGCTCG
CTGGATGCGGTGGTCGAGGACTGCGTGAACGCCGTCGGCGTCGACGTCAACACCGCTTCCGCCGCGCTGCTGGCGCGCAT
CTCCGGGCTCAACGCGACGCTGGCCAACAACATCGTGCAGTACCGCGACGCCAACGGCGCATTCGCCTCCCGCGCACAGC
TGAAGAAGGTCCCGCGCCTGGGCGAGAAAACCTTCGAGCAGGCCGCCGGCTTCCTCCGCGTGATGAACGGCGACAACCCG
CTGGACGCCTCCGCGGTGCACCCGGAAACCTATCCGCTGGTCACCCGCATCGCCGCCGATACCGGCCGCGACATCCGTTC
GCTGATCGGCGACTCGGCCTTCCTCAAGCGCCTCGACCCGCAGAAATTCACCGACGAGACCTTCGGCCTGCCCACCGTAA
CCGACATCCTCGGCGAGCTGGACAAGCCCGGCCGTGACCCGCGCCCCGAGTTCAAGACCGCCGAGTTCCAGGAGGGCGTG
GAGAAGCTCAGCGACCTCGAACCCGGCATGGTGCTCGAAGGCGTGGTGACCAACGTGACCAACTTCGGCGCCTTCGTCGA
CATCGGTGTGCACCAGGATGGCCTGGTGCACATCAGCGCGCTGTCGGAAAAGTTCGTCAAAGACCCCTACGAAGTGGTCA
AAGCCGGTGACATCGTCAAGGTCAAGGTCATGGAGGTGGACATCCCGCGTAACCGCGTCGGCCTGTCCATGCGCATGAGC
GACACCCCCGGCGAGAAGACCGAAGGCCCCCGTGGCGGCAAGCCACGCGGCAACGCACCGCGCAGCGAGCGCCATGCGCC
GCAGGACAAGCCGGCACCGGCCAACAACGCCATGGCGGCGCTGTTCGCCAATGCCAAGCAGTTGAGGAAATAA

Protein sequence :
MDSINSRIANELGVRPQQVAAAVALLDEGSTVPFIARYRKEVTGSLDDTQLRNLEERLRYLRELDERRASILASIEEQGK
LTPELAREINLADTKTRLEDLYLPYKQKRRTKGQIALEAGLGELADALFADPSLTPETEAERFIDAEKGFADTKAVLEGA
KYILMERFAEDADLLAKLRDFLKHNATFSARVVPGKENEGAKFSDYFEHDEILKNTPSHRALAIFRGRNEGILSIALKVG
DEAPGSMHPGETMIGERFGIDNRGRAADKWLGEVVRWTWKVKLYTHLETDLLGELRDKAEDEAISVFARNLHDLLLAAPA
GPRATLALDPGLRTGCKVAVVDATGKLLDTATVYPHAPRNDWDGTLAILARLCAKHGVDLIAIGNGTASRETDKLAGELI
KKVPGLKLTKIMVSEAGASVYSASELAAKEFPDLDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVSQLKLARS
LDAVVEDCVNAVGVDVNTASAALLARISGLNATLANNIVQYRDANGAFASRAQLKKVPRLGEKTFEQAAGFLRVMNGDNP
LDASAVHPETYPLVTRIAADTGRDIRSLIGDSAFLKRLDPQKFTDETFGLPTVTDILGELDKPGRDPRPEFKTAEFQEGV
EKLSDLEPGMVLEGVVTNVTNFGAFVDIGVHQDGLVHISALSEKFVKDPYEVVKAGDIVKVKVMEVDIPRNRVGLSMRMS
DTPGEKTEGPRGGKPRGNAPRSERHAPQDKPAPANNAMAALFANAKQLRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 0.0 63