Gene Information

Name : PSJM300_15770 (PSJM300_15770)
Accession : YP_006525572.1
Strain : Pseudomonas stutzeri DSM 10701
Genome accession: NC_018177
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3439234 - 3440754 bp
Length : 1521 bp
Strand : +
Note : COG1012 NAD-dependent aldehyde dehydrogenases

DNA sequence :
ATGATTTACGCAAAACCCGGTACGCCTGGCGCCGTCCTGTCCCTCGAAGCGCGCTACGGCAACTACATCGGTGGCGAATT
CACCGCCCCGGTCAACGGTGAATATTTCGTCAATACCAGCCCGGTCGATGGTTCGGTCATCGGCGAATTCCCCCGCTCCG
ACGCCGCCGACATCGAAAAGGCGCTGGACGCCGCCCACGCCGCCGCAGACGCCTGGGGCAAGACCAGCGTGCAGGCCCGT
TCGTTGATCCTGCTGAAGATTGCCGATCGCATCGAAGCCAACCTGGAAAAGCTCGCCGTCGCTGAAACCTGGGACAACGG
CAAGGCGGTGCGCGAGACGCTGAACGCCGACATCCCGCTGGCGGCCGACCACTTCCGCTACTTCGCCGGCTGCATCCGCG
CCCAGGAAGGCACCAGCGCCGAGATCGACGAACACACCGCGGCCTACCATTTTCATGAACCGCTGGGCGTGGTCGGGCAG
ATCATCCCGTGGAACTTCCCGATCCTGATGGCCTGCTGGAAGCTCGCCCCGGCCCTGGCCGCCGGCAACTGCGTGGTCCT
GAAGCCCGCCGAACAGACCCCGCTGGGCATCACCGTGCTGGTCGAACTGATCGGCGACCTGCTGCCGCCGGGCGTGCTCA
ATATCGTCCAGGGCTTCGGCAAGGAAGCGGGCGAGGCACTGGCCAGCAACAAACGCATCGCCAAGATCGCCTTCACCGGC
TCCACCCCGGTGGGCTCGCACATCATGAAGCTGGCCGCCGAGAACATCATCCCGAGCACCGTCGAGCTGGGCGGCAAGAG
CCCGAACATCTACTTCGAAGACATCATGCAGGCCGAACCGACCTTCATCGAGAAGGCCGCCGAAGGGCTGGTGCTGGGCT
TCTTCAACCAGGGCGAGGTCTGCACCTGTCCGTCGCGGGCGCTGGTACAGGAATCCATCTACTCCTCCTTCATGGACGTG
GTGATGAAGAAGGTCGCGCAGATCAAGCGCGGCGACCCGCTGGACACCGACACCATGGTCGGCGCCCAGGCCAGCCAGCA
GCAGTTCGACAAGATCGTCGGCTACCTGGAGATCGCCCGCCAGGAAGGCGCCGAGGTGCTGACCGGCGGCGGTGTGGAGA
AACTCGAGGGCTCGCTCGCATCGGGTTACTACATCCAGCCGACGCTGCTCAAGGGACACAACAAGATGCGCGTGTTCCAG
GAGGAGATCTTCGGCCCGGTGATCGGCGTGGCCACCTTCAAGGACGAGGCCGAGGCGCTGGCCATCGCCAACGACACCGA
GTTCGGCCTGGGCGCCGGCGTCTGGACCCGCGACATCAACCGTGCCTACCGCATGGGTCGCGGGATCAAGGCCGGACGGG
TGTGGACCAACTGCTACCACCTGTACCCCGCGCATGCCGCGTTCGGTGGCTACAAGAAGTCCGGTATCGGTCGCGAAACC
CACAAGATGATCCTCGACCATTACCAGCAGACCAAGAACCTGCTGATCAGCTACGACATCAACCCGCTGGGCTTCTTCTG
A

Protein sequence :
MIYAKPGTPGAVLSLEARYGNYIGGEFTAPVNGEYFVNTSPVDGSVIGEFPRSDAADIEKALDAAHAAADAWGKTSVQAR
SLILLKIADRIEANLEKLAVAETWDNGKAVRETLNADIPLAADHFRYFAGCIRAQEGTSAEIDEHTAAYHFHEPLGVVGQ
IIPWNFPILMACWKLAPALAAGNCVVLKPAEQTPLGITVLVELIGDLLPPGVLNIVQGFGKEAGEALASNKRIAKIAFTG
STPVGSHIMKLAAENIIPSTVELGGKSPNIYFEDIMQAEPTFIEKAAEGLVLGFFNQGEVCTCPSRALVQESIYSSFMDV
VMKKVAQIKRGDPLDTDTMVGAQASQQQFDKIVGYLEIARQEGAEVLTGGGVEKLEGSLASGYYIQPTLLKGHNKMRVFQ
EEIFGPVIGVATFKDEAEALAIANDTEFGLGAGVWTRDINRAYRMGRGIKAGRVWTNCYHLYPAHAAFGGYKKSGIGRET
HKMILDHYQQTKNLLISYDINPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 6e-154 66
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 8e-160 64
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 8e-160 64
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 8e-160 64
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-159 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSJM300_15770 YP_006525572.1 aldehyde dehydrogenase VFG0082 Protein 2e-154 66