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Name : PSJM300_13290 (PSJM300_13290) Accession : YP_006525078.1 Strain : Pseudomonas stutzeri DSM 10701 Genome accession: NC_018177 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : - COG ID : - EC number : - Position : 2916779 - 2918728 bp Length : 1950 bp Strand : - Note : COG0550 Topoisomerase IA DNA sequence : ATGCGGCTGTTTCTCTGCGAAAAACCCTCCCAGGCCAAAGACATCGCCAAGGTGCTCGGCGCCAACCGGCGTGGCGACGG CTGCTGGCTCGGCCCCGGCGTGACGGTGACCTGGTGCATCGGCCATCTGCTGGAAACCGCCCCGCCGGACGCCTATGACG CCCGCTACAAACGCTGGGTGCTGGGCGATCTGCCAATCGTGCCCGAACGCTGGAAGATGCTGGTCAAGCCGAAGACCGCC AGCCAGTTCAAGGCGGTCAAGCGTTTGCTGGGCGAGGCCTGCGAACTGGTGATCGCCACCGATGCCGACCGCGAAGGCGA GATGATCGCCCGCGAGCTGGTGGAGCACTGCCGTTATCGCGGCCCCATCCAGCGCCTCTGGCTCTCGGCGCTGGACGATG CCTCGATCCGCAAGGCGCTGGCCGCGCTCAAGCCCGGCGCGGAAACCTTCAGCCTCTACCATTCGGCGCTGGGCCGCTCG CGGGCCGACTGGCTGATGGGCATGAACATGAGCCGGCTGTTCACCCTGCTCGGGCGGCAGTCCGGTTACCAGGGCGTGCT GCCGGTGGGCCGCGTGCAGACGCCCACCCTGCGCCTGGTGGTGGATCGCGACCGCAGTATCGCCGACTTCGTGCCGGTGC CCTACTGGACCATCGAGGTCGCGCTGCAGGCCGGCGATATACCCTTCACCGCGCAATGGCGCGCAGCCGAGGATCGCTGC GACGACCAGGGGCGCTGCCTCGACCCGGAACATGCGCGCCAGGCCGCCGCCGCCATCGGCAGTGCCACCCAGGCACTGGT GGTGAAGCTGCGCACCGAACGCATGCGCGAAGCGCCGCCGCTGCCCTTCGACCTCGGCACCCTGCAGGAAATCTGCTCGA AGAAACTCGGCCTTGGCGCCCAGGAAACCCTGGATATCGCCCAGTCGCTCTACGAAATCCACAAGCTGATCACCTACCCG CGCAGCGACTGCGGCTACCTGCCGCTGAGCCAGCACGGCGAGGCGCCGGCGATCATCGCCGCCCTGGGTCGCAGCGATCC CTCGCTGTCCGAACTGCTCACGCTCGTGCAGCCACAACGCCGCTCGCGCGCCTGGAACGATGGCAAGGTCGGCGCCCACC ACGGCATCATCCCCACCGCCGCCGCGACCGATCTGTCGCGGCTGGCGGGCAAGCAGCGCGCGGTCTATACGCTGGTCCGC GCCCGCTACCTGGCGCAGTTCCTGCCCAACCACGAATACGACCGCACCCAGGCCGACTTCGACTGCGCCGGGCAGGCGCT GCGGGCGGTGGGCAAGGTGATCGTCGAGCCCGGCTGGCGCCGCGCGTTGCCCGAAGCCCTGACACCCGCAAAGGGCCGTG AGCCGACACCGGCCCAGGCACTACCGCCGTTGAGCGAGGGCCAGCACTGCAACGTCATGGGCGTAAACCTCAAGGATCTC TGGACCCAGCCGCCCAAGCCCTTCACTGAAGGCGACCTGATCAAGGCGATGAAGAACGTCGCCAGGCTGGTGGACGACCC GCGCCTGAAGCAGAAACTCAAGGACACCACCGGCATCGGCACCGAAGCGACACGGGCCGGCATCATCCAGGGGCTGCTCG ATCGCGGCTACCTGAGCAAACAGGGCAAGGCGCTGTCGGCCAGCCCGGCGGCCTTCAGCCTGATCGACGCCGTACCACGG GCGATTGCCGACCCAGGCACCACCGCGATCTGGGAACAGGCGCTGGACATGGTGCAGAGCGGCGAGATGAGCCTGGAGGA ATTCGTCGCCAAGCAATCCGCCTGGATGAGCAAGCAGGTCGAGCGCTGCCGCGACCTGCGCCTGACCATCAGCGGCCCGC CGAACCCGCCCGGCAAAGGCGCGCCCTGGAAGAAGAAGCGCAAGGCGGCGCCGCGCAAGAATGCCAGCGCCGGCAAGCGG AAGTCGCGCAAGGCGTCAGTCGAGGCGTAA Protein sequence : MRLFLCEKPSQAKDIAKVLGANRRGDGCWLGPGVTVTWCIGHLLETAPPDAYDARYKRWVLGDLPIVPERWKMLVKPKTA SQFKAVKRLLGEACELVIATDADREGEMIARELVEHCRYRGPIQRLWLSALDDASIRKALAALKPGAETFSLYHSALGRS RADWLMGMNMSRLFTLLGRQSGYQGVLPVGRVQTPTLRLVVDRDRSIADFVPVPYWTIEVALQAGDIPFTAQWRAAEDRC DDQGRCLDPEHARQAAAAIGSATQALVVKLRTERMREAPPLPFDLGTLQEICSKKLGLGAQETLDIAQSLYEIHKLITYP RSDCGYLPLSQHGEAPAIIAALGRSDPSLSELLTLVQPQRRSRAWNDGKVGAHHGIIPTAAATDLSRLAGKQRAVYTLVR ARYLAQFLPNHEYDRTQADFDCAGQALRAVGKVIVEPGWRRALPEALTPAKGREPTPAQALPPLSEGQHCNVMGVNLKDL WTQPPKPFTEGDLIKAMKNVARLVDDPRLKQKLKDTTGIGTEATRAGIIQGLLDRGYLSKQGKALSASPAAFSLIDAVPR AIADPGTTAIWEQALDMVQSGEMSLEEFVAKQSAWMSKQVERCRDLRLTISGPPNPPGKGAPWKKKRKAAPRKNASAGKR KSRKASVEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 0.0 | 64 |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 0.0 | 63 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 0.0 | 63 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 9e-153 | 50 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 1e-152 | 50 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 1e-152 | 50 |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 8e-150 | 50 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 1e-145 | 50 |
| topB | AAW83109.1 | TopB | Not tested | GGI | Protein | 1e-116 | 43 |
