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Name : lysS (PSJM300_13125) Accession : YP_006525045.1 Strain : Pseudomonas stutzeri DSM 10701 Genome accession: NC_018177 Putative virulence/resistance : Virulence Product : lysyl-tRNA ligase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 2879871 - 2881373 bp Length : 1503 bp Strand : + Note : COG1190 Lysyl-tRNA synthetase (class II) DNA sequence : ATGAGCGAACAACCGCTGAACCAGCACGCCATCCAAGAGGAAGAAAACAGCCTGATCCTTCAGCGCAAGGAAAAACTGGC CGCCGAGCGCGCCAGGGGCAACGTCTTCCCCAACGACTTCCGTCGCGACAGCTACTGCAACGACCTGCAGTTGAAATACG CCGACAAGAGCAAGGAAGAGCTGGAGGCAGCGGCCATTCCGGTGAAGATCGCCGGGCGCATCATGCTCAACCGCGGCGCC TTCATGGTCCTGCAGGACATGACCGGACGCATCCAGGTCTACGTCGACCGCAAGGGCCTGCCGGTCGAGACGCTCGAAGC GATCAAGACCTGGGACCTGGGCGACATCGTGGCCGCCGAAGGTACTCTGGCGCGTTCGGGCAAGGGCGACCTGTACGTCA ACATGAGCGCCGTGCGCCTGCTGACCAAATCCCTGCGTCCGCTGCCGGACAAGCACCACGGTCTGACCGACACCGAGCAG CGCTACCGCCAGCGCTACGTCGACCTGATCGTCAACGAGGAAACCCGCCACACCTTCCGCGTGCGTTCCAAGGTCATCGC GCATATCCGCAAGTTCCTCGCCGAGCGCGACTTCCTCGAAGTGGAAACGCCGATGCTGCAGACCATTCCCGGCGGTGCTG CGGCCAAGCCGTTCGAGACGCATCACAACGCCCTCGACCTGCCGATGTTCCTGCGTATCGCGCCCGAGCTGTATCTCAAG CGCCTGGTGGTCGGCGGCTTTGAGCGGGTGTTCGAGATCAACCGCAACTTCCGCAACGAAGGCGTCTCGACACGGCACAA CCCCGAGTTCACCATGCTCGAGTTCTACCAGGCCTACGCCGACTACGAAGACAACATGGACCTCACCGAGGAGCTGTTCC GCGAGTTGGCCCAGGCTGTGCTCGGCAGCACCGACGTGCCTTACGGAGACAAGGTGTTCCACTTCGGTGAGCCCTTCGCG CGACTGTCGGTGTTCGAATCGATCCTGCAGTACAACCCCGATATCTCGGCCGCCGACCTCAACGACCTGGAAAAAGCCCG TGAGATCGCCAAGCGAGCCGGCGCCAAGCTGCTCGGCCATGAAGGCCTGGGCAAGCTGCAGGTGATGATCTTTGAAGAAC TGGTCGAGCACCGCCTGGAGCAGCCGACCTTCATCACCGAATACCCCTTCGAGGTGTCGCCGCTGGCTCGCCGCAACGAC AAGAACCCGAACGTCACCGACCGCTTCGAGCTGTTCATCGGTGGCCGCGAGATCGCCAACGCCTATTCCGAGCTCAACGA TGCGGAGGACCAGGCCGAGCGCTTCCACGCCCAGGTGGCGGAGAAGGATGCGGGCGACGACGAGGCCATGCACTTCGATG CTGACTTCGTCCGCGCCCTGGAATACGGCATGCCGCCCACCGCGGGCGAAGGCATCGGCATCGACCGCCTGGTGATGCTG CTGACCAACTCGCCGTCCATCCGCGACGTGATCCTCTTCCCGCACATGCGTCCGGAAGTCTGA Protein sequence : MSEQPLNQHAIQEEENSLILQRKEKLAAERARGNVFPNDFRRDSYCNDLQLKYADKSKEELEAAAIPVKIAGRIMLNRGA FMVLQDMTGRIQVYVDRKGLPVETLEAIKTWDLGDIVAAEGTLARSGKGDLYVNMSAVRLLTKSLRPLPDKHHGLTDTEQ RYRQRYVDLIVNEETRHTFRVRSKVIAHIRKFLAERDFLEVETPMLQTIPGGAAAKPFETHHNALDLPMFLRIAPELYLK RLVVGGFERVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQAVLGSTDVPYGDKVFHFGEPFA RLSVFESILQYNPDISAADLNDLEKAREIAKRAGAKLLGHEGLGKLQVMIFEELVEHRLEQPTFITEYPFEVSPLARRND KNPNVTDRFELFIGGREIANAYSELNDAEDQAERFHAQVAEKDAGDDEAMHFDADFVRALEYGMPPTAGEGIGIDRLVML LTNSPSIRDVILFPHMRPEV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-137 | 60 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 2e-81 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_006525045.1 | lysyl-tRNA ligase | VFG1668 | Protein | 7e-138 | 60 |
