Gene Information

Name : PSJM300_12335 (PSJM300_12335)
Accession : YP_006524889.1
Strain : Pseudomonas stutzeri DSM 10701
Genome accession: NC_018177
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2712326 - 2713228 bp
Length : 903 bp
Strand : +
Note : COG2801 Transposase and inactivated derivatives

DNA sequence : 
ATGAAGGCGTTCGTCGACGAGCATCGTGCGGTTTATGGAGTCGAGCCGATCTGCCGGGTACTGCCGATCGCTCCATCGAC
CTACTACGCCCATGCACATTGCCAGGCCGCTCCCGAGCGGCGTTCTCCGCGAACACGGCGTGACGAGGTACTGAGCGGGC
ATATCCAGCGGGTCTGGGAGGAGAACTTCCAGGTCTACGGCGTGCGCAAGGTCTGGCGGCAACTCAAGCGCGAAGGCGTA
GTGGTGGCCCGCTGCACGGTGGAGCGACTGATGCGGCGACTGGGTCTACAAGGTGTCGTACGCGGCAAACCGGTCAAGAC
TACGATCAGCGACAAGGCCACCCCGTGCTCGCTGGACAAGGTCAATCGCCAGTTCCGCGCCGAGCGGCCAAACGCGCTCT
GGGTGTCGGACTTCACCTACGTCAGCACGTGGCAGGGCTTCATCTACGTGGCCTTTGTCATCGACGTATTCGCCCGGCGT
ATCGTCGGCTGGCGCGTGTCCAGCTCAGCCCGCACAGACTTTGTTCTCGATGCGTTGGAACAGGCGTTGTATGCCCGCCG
ACCGGTCGGCCAGGGCAGCCTGATCCATCACAGCGACCGTGGCGTGCAGTACGTCTCGATCCGCTATACCGAGCGCCTAG
CTGAAGCTGGGGTCGAGCCCTCGGTGGGCAGCGTGGGCGACTCCTATGACAATGCCTTGGCCGAGACCATCAATGGCCTG
TACAAGGCCGAGGTGATCCATCGTCGTTCCTGGCAGAATCGGGAGGCAGTGGAGCTGGCGACGCTGGAGTGGGTGGACTG
GTTCAACCACCGACGGCTACTGGAGCCCATCGGGAACATGCCGCCGGCAGAGGCCGAAGCGATCTACTATCAGCAACTTA
CCGAGTCGGCCCAAGCGGCATGA

Protein sequence : 
MKAFVDEHRAVYGVEPICRVLPIAPSTYYAHAHCQAAPERRSPRTRRDEVLSGHIQRVWEENFQVYGVRKVWRQLKREGV
VVARCTVERLMRRLGLQGVVRGKPVKTTISDKATPCSLDKVNRQFRAERPNALWVSDFTYVSTWQGFIYVAFVIDVFARR
IVGWRVSSSARTDFVLDALEQALYARRPVGQGSLIHHSDRGVQYVSIRYTERLAEAGVEPSVGSVGDSYDNALAETINGL
YKAEVIHRRSWQNREAVELATLEWVDWFNHRRLLEPIGNMPPAEAEAIYYQQLTESAQAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 Protein 6e-67 70
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 2e-76 70
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 Protein 1e-66 69
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 9e-88 66
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 9e-88 66
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 8e-88 66
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 4e-87 66
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 8e-86 65
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 7e-86 65
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 5e-85 65
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 8e-86 65
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 8e-86 65
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 1e-86 65
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 5e-88 65
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 5e-86 65
Z1221 NP_286756.1 transposase Not tested TAI Protein 3e-86 65
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 2e-86 65
Z1198 NP_286733.1 transposase Not tested TAI Protein 1e-85 64
Z1638 NP_287141.1 transposase Not tested TAI Protein 1e-85 64
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 4e-84 64
c5167 NP_757015.1 transposase IS629 Not tested PAI II CFT073 Protein 3e-60 64
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 5e-59 48
CDCE8392_1958 YP_005134489.1 transposase-like protein Not tested Not named Protein 8e-42 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSJM300_12335 YP_006524889.1 hypothetical protein VFG1602 Protein 2e-84 64