Gene Information

Name : PSJM300_12330 (PSJM300_12330)
Accession : YP_006524888.1
Strain : Pseudomonas stutzeri DSM 10701
Genome accession: NC_018177
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2712006 - 2712329 bp
Length : 324 bp
Strand : +
Note : COG2963 Transposase and inactivated derivatives

DNA sequence :
ATGAAGACGACGACGAAGTACTCCCCGGAAGTCCGCGAGCGAGCGGTTCGACTGGTATTGGAACATCAAGGCAACCACGA
GTCGGAATGGGCAGCGATTTGCTCGATTTCTGCCAAGATCGGTTGTACCGCCGAAACACTGCGCCGTTGGGTACGCCAGG
CCGAGCGCGATACTGGCAAACGTGAAGGCCAGACCAGCAGCGAACGCGAGCGGATCAAGGCGCTGGAACGTGAGGTGCGT
GAGTTGCGCCAGGCCAACGAGATCCTGCGCAAGGCGTCCGCGTATTTTGCCCAGGCGGAGCTCGACCGCCGCTTCAAGCC
ATGA

Protein sequence :
MKTTTKYSPEVRERAVRLVLEHQGNHESEWAAICSISAKIGCTAETLRRWVRQAERDTGKREGQTSSERERIKALEREVR
ELRQANEILRKASAYFAQAELDRRFKP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1199 NP_286734.1 hypothetical protein Not tested TAI Protein 1e-29 68
Z1222 NP_286757.1 hypothetical protein Not tested TAI Protein 1e-29 68
Z1639 NP_287142.1 hypothetical protein Not tested TAI Protein 1e-29 68
Z1661 NP_287163.1 hypothetical protein Not tested TAI Protein 1e-29 68
ECO111_3720 YP_003236060.1 putative IS629 transposase OrfA Not tested LEE Protein 2e-27 67
ECO111_3775 YP_003236110.1 putative IS629 transposase OrfA Not tested LEE Protein 2e-27 67
Z4335 NP_289560.1 hypothetical protein Not tested OI-122 Protein 2e-27 67
IS629 CAC37925.1 hypothetical protein Not tested LEE Protein 3e-29 66
IS629 CAI43820.1 hypothetical protein Not tested LEE Protein 3e-29 66
IS629 CAI43841.1 hypothetical protein Not tested LEE Protein 3e-29 66
IS629 CAI43908.1 hypothetical protein 1 Not tested LEE Protein 3e-29 66
ECO103_3584 YP_003223442.1 IS629 transposase OrfA Not tested LEE Protein 5e-29 66
unnamed AAF09023.1 unknown Not tested SHI-O Protein 1e-26 65
tnpE AAD44738.1 TnpE Not tested SHI-2 Protein 1e-26 65
unnamed CAD42084.1 hypothetical protein Not tested PAI II 536 Protein 8e-26 65
unnamed AAL67399.1 TnpE-like protein Not tested PAI II CFT073 Protein 3e-26 64
c5168 NP_757016.1 hypothetical protein Not tested PAI II CFT073 Protein 4e-26 64
unnamed ADD91740.1 hypothetical protein Not tested PAI-I AL862 Protein 3e-26 64
c5214 NP_757062.1 hypothetical protein Not tested PAI II CFT073 Protein 4e-26 64
S3184 NP_838467.1 IS629 orfA Not tested SHI-1 Protein 4e-26 64
SF2979 NP_708753.1 IS629 ORF1 Not tested SHI-1 Protein 4e-26 64
APECO1_3498 YP_854313.1 transposase; OrfA protein of insertion sequence IS629 Not tested PAI I APEC-O1 Protein 1e-24 64
ORF_36 AAZ04445.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 7e-25 64
S4062 NP_839231.1 IS629 orfA Not tested SHI-2 Protein 5e-25 64
SF3706 NP_709445.1 IS629 ORF1 Not tested SHI-2 Protein 1e-25 64
c3596 NP_755471.1 hypothetical protein Not tested PAI I CFT073 Protein 4e-24 62
c5177 NP_757025.1 hypothetical protein Not tested PAI II CFT073 Protein 4e-24 62
r13 AAC61722.1 R13 Not tested PAI I CFT073 Protein 3e-24 62
ECUMN_3344 YP_002414020.1 transposase ORF A, IS629 Not tested Not named Protein 4e-24 62
unnamed AAL67404.1 R13-like protein Not tested PAI II CFT073 Protein 3e-24 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSJM300_12330 YP_006524888.1 hypothetical protein VFG1603 Protein 3e-26 65
PSJM300_12330 YP_006524888.1 hypothetical protein VFG0606 Protein 4e-26 64
PSJM300_12330 YP_006524888.1 hypothetical protein VFG0643 Protein 1e-26 64
PSJM300_12330 YP_006524888.1 hypothetical protein VFG1717 Protein 1e-24 62