Gene Information

Name : PSJM300_11940 (PSJM300_11940)
Accession : YP_006524810.1
Strain : Pseudomonas stutzeri DSM 10701
Genome accession: NC_018177
Putative virulence/resistance : Unknown
Product : Na+/H+ antiporter NhaC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2620378 - 2621694 bp
Length : 1317 bp
Strand : -
Note : COG2056 Predicted permease

DNA sequence :
ATGAATGCGGTAGTCGCAGCGGTAGCGATCATGCTGGTTCTCAGCTTGTGCCGGGTTCACGTGGTGGTGGCGCTCATCGC
TGGCGCCATCGCGGGGGGACTGTTGGGCGGGCTGGGCATCGAGGGTAGCCTGGCTGCCTTCAACAAGGGTTTGGGTGGCG
GTGCCACGGTCGCGCTTTCCTATGCATTGCTCGGCGCATTTGCCGTGGCGATCGGCAAGAGCGGATTGGCCCATGCATTG
GCAGACAAGGTGCTGGCTGTACTCGGTCGGAAAGAGGTGAGCGGTGGTGGCGCGGTCAAGTGGATGCTGGTCGGCCTGCT
ACTGGCTGTGGCGATTTCGTCCCAGAACATCCTGCCGATTCATATCGCCTTCATCCCGCTGCTGGTTCCGCCACTGCTTT
ATGTGCTGACCAAGCTTCAGATCGATCGCCGGCTGATCGCCTGCGTCCTCGCATTCGGTCTGATCACGCCGTACATGTTC
CTGCCGGTCGGGTTTGGCAATATCTTCCTCAAGGAGATCCTGCTCGCCAACGTCGCCAAGAGCGGGGCAGATGTAGCGGG
CGTCGCCGTTACTCAGGCCATGCTGATTCCGGCGCTGGGAATGGTCACCGGCCTGTTGATCGCACTGTTCAGCTATCGCA
AGCCGCGGGCGTACGAGTTGCAGAAAGTCGACGGCTCGGTGCAGGCGGGCGTCCAGTACAGCCCGCTGACGCTGCTCGTC
GCGGGCGTTGCGATTGCGGTCGCTTTCGCCATTCAGTTGTGGCTCGACTCGATGATCATCGGCGCGCTGGCAGGCTTCGT
GATCTTCTCGGTCTCGCGGGTAGTGCGTTGGCGCGAAACCGATGACCTGTTCACCGAAGGCATGAAGATGATGGCGATGA
TCGGTTTCATCATGATCGCCGCCTCGGGTTTCGCCGAAGTCATGCGCGAGACCGGTCAGGTGAAAACGCTGGTCGATGCG
TCAGCGCAATTGATTGGCAACAGCAAGGCGGTAGGCGCGCTGCTGATGTTGTTGGTTGGCCTGCTGGTGACCTTGGGCAT
AGGCTCGTCGTTTTCCACCGTCCCGATCATCGCCGCGATCTTCGTGCCTCTCAGCATGGAGCTGGGTTTCAGCACCCTGG
CCATCGTCAGCCTGGTCGGAACCGCTGGCGCCCTGGGCGATGCCGGCTCGCCAGCTTCCGACTCGACGCTGGGCCCGACG
GCGGGGCTGAACGTGGATGGCCAGCACAACCATATCTGGGATACGGTGGTACCGACCTTCCTCCACTACAACCTGCCGCT
GCTGGTATTCGGCTGGGTTGCGGCCATGGTGCTCTGA

Protein sequence :
MNAVVAAVAIMLVLSLCRVHVVVALIAGAIAGGLLGGLGIEGSLAAFNKGLGGGATVALSYALLGAFAVAIGKSGLAHAL
ADKVLAVLGRKEVSGGGAVKWMLVGLLLAVAISSQNILPIHIAFIPLLVPPLLYVLTKLQIDRRLIACVLAFGLITPYMF
LPVGFGNIFLKEILLANVAKSGADVAGVAVTQAMLIPALGMVTGLLIALFSYRKPRAYELQKVDGSVQAGVQYSPLTLLV
AGVAIAVAFAIQLWLDSMIIGALAGFVIFSVSRVVRWRETDDLFTEGMKMMAMIGFIMIAASGFAEVMRETGQVKTLVDA
SAQLIGNSKAVGALLMLLVGLLVTLGIGSSFSTVPIIAAIFVPLSMELGFSTLAIVSLVGTAGALGDAGSPASDSTLGPT
AGLNVDGQHNHIWDTVVPTFLHYNLPLLVFGWVAAMVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1474 YP_005683838.1 Na+/H+ antiporter NhaC Not tested PiCp 5 Protein 4e-79 56
CpI19_1481 YP_005685924.1 Na+/H+ antiporter NhaC Not tested PiCp 5 Protein 4e-79 56
Cp1002_1472 YP_005681739.1 Na+/H+ antiporter NhaC Not tested PiCp 5 Protein 3e-79 56
cpfrc_01481 YP_003783881.1 hypothetical protein Not tested PiCp 5 Protein 3e-79 56
BJAB0868_00356 YP_008211682.1 putative permease Not tested AbaR26 Protein 4e-73 51
BJAB07104_00352 YP_008207817.1 putative permease Not tested AbaR25 Protein 4e-73 51