Gene Information

Name : PSJM300_11120 (PSJM300_11120)
Accession : YP_006524646.1
Strain : Pseudomonas stutzeri DSM 10701
Genome accession: NC_018177
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2441664 - 2443184 bp
Length : 1521 bp
Strand : -
Note : COG1012 NAD-dependent aldehyde dehydrogenases

DNA sequence :
ATGATCTACGCCCAACCCGGTACCGCAGGCGCTGTCGTTTCCTTCAAGCCACGCTACGGCAACTACATCGGTGGCGAATT
CGTGCCGCCAGTAAAAGGTGAGTATTTCGTCAACACCTCACCGGTAAATGGGGAAGTCATCGCAGAGTTCCCGCGCTCGG
GTGCCGAAGACATCGAAAAGGCGCTGGACGCCGCCCATGCCGCTGCCGATGCCTGGGGCAAGACCTCGGTGCAGGACCGC
GCGCTGATCCTGCTGAAGATCGCCGATCGCATCGAAGCCAACCTGGAACAGCTGGCCGTCGCCGAGACCTGGGACAACGG
CAAGGCCGTGCGCGAGACGCTGAACGCCGACGTGCCGCTGGCCGCCGACCACTTCCGCTACTTCGCCGGCTGCATCCGCG
CCCAGGAAGGCAGCGCCGCCGAGATCAACGAGCACACCGCCGCCTATCACTTCCACGAGCCGCTGGGCGTGGTCGGGCAG
ATCATTCCATGGAACTTCCCGCTGCTGATGGCCGCCTGGAAGCTGGCCCCGGCCCTGGCCGCCGGCAACTGCGTGGTACT
GAAACCGGCCGAGCAGACGCCGCTGTCGATCATGGTCTTCGCCGAAATCATCGGCGACCTGCTGCCGCCGGGCGTACTCA
ACATCGTCCAGGGCTTCGGCCGTGAGGCCGGCCAGGCGCTGGCCACCAGCACCCGCATCGCCAAGATCGCCTTCACCGGC
TCGACCCCGGTGGGCGCGCACATCATGCGTTGCGCCGCCGAGAACATCATTCCGAGCACCGTGGAGCTGGGCGGCAAGAG
CCCGAACATCTTCTTCGAGGACATCATGCAGGCCGAGCCGGCCTTCATCGAGAAGGCCGCCGAAGGCTTGGTGCTGGCGT
TCTTCAACCAGGGCGAGGTGTGCACCTGCCCGTCGCGCGCAGTGATTCAGGAATCGATCTTCGAGCCCTTCATGGAAGTG
GTGATGAAGAAGATCCAGCAGATCAAGCGCGGCAACCCGCTGGACACCGAGACCATGGTCGGCGCCCAGGCGTCCGAGCA
GCAGTTCGACAAGATCCTCTCCTACATGGAAGTCGCCCGCCAGGAAGGCGGCCAGATTCTCACCGGCGGCGCCGCCGAGA
AACTCGAAGGCAGCCTGGCGACCGGCTATTACGTGCAGCCGACCCTGATCAAGGGCCACAACAAGATGCGCGTGTTCCAG
GAGGAGATCTTCGGGCCAGTGGTGGCCGTGACCACCTTCAAGGACGAGGCCGAAGCTCTGGCCATCGCCAACGACTCCGA
GTTCGGCCTGGGTGCCGGCGTCTGGACCCGCGACATCAACCGCGCCTACCGCATGGGCCGCGGGATCAAGGCCGGTCGCG
TCTGGACCAACTGCTACCACCTGTACCCGGCGCATGCCGCGTTCGGCGGCTACAAGAAGTCCGGCGTCGGTCGCGAGACC
CACAAGATGATGCTCGACCACTACCAGCAGACCAAGAACCTGCTGGTGAGCTACGACATCAATCCGCTCGGTTTCTTCTG
A

Protein sequence :
MIYAQPGTAGAVVSFKPRYGNYIGGEFVPPVKGEYFVNTSPVNGEVIAEFPRSGAEDIEKALDAAHAAADAWGKTSVQDR
ALILLKIADRIEANLEQLAVAETWDNGKAVRETLNADVPLAADHFRYFAGCIRAQEGSAAEINEHTAAYHFHEPLGVVGQ
IIPWNFPLLMAAWKLAPALAAGNCVVLKPAEQTPLSIMVFAEIIGDLLPPGVLNIVQGFGREAGQALATSTRIAKIAFTG
STPVGAHIMRCAAENIIPSTVELGGKSPNIFFEDIMQAEPAFIEKAAEGLVLAFFNQGEVCTCPSRAVIQESIFEPFMEV
VMKKIQQIKRGNPLDTETMVGAQASEQQFDKILSYMEVARQEGGQILTGGAAEKLEGSLATGYYVQPTLIKGHNKMRVFQ
EEIFGPVVAVTTFKDEAEALAIANDSEFGLGAGVWTRDINRAYRMGRGIKAGRVWTNCYHLYPAHAAFGGYKKSGVGRET
HKMMLDHYQQTKNLLVSYDINPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-149 65
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 4e-157 64
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 4e-157 64
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 4e-157 64
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-156 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSJM300_11120 YP_006524646.1 aldehyde dehydrogenase VFG0082 Protein 1e-149 65