Gene Information

Name : PSJM300_10255 (PSJM300_10255)
Accession : YP_006524475.1
Strain : Pseudomonas stutzeri DSM 10701
Genome accession: NC_018177
Putative virulence/resistance : Unknown
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2239848 - 2241491 bp
Length : 1644 bp
Strand : +
Note : COG4172 ABC-type uncharacterized transport system, duplicated ATPase component

DNA sequence :
ATGGCTGACAATCTGATCGAGGTTCGCAACCTCGCCGTGGAATTCGTCAGCGGCGAGCAGACCCAGCGCGTGGTCGAGGG
CGTCAGCTTCGACATTCGCAAGGGCGAAACCCTGGCCCTGGTCGGCGAAAGCGGTTCCGGCAAATCGGTGACCGCCCACT
CCATCCTGCGGCTGCTGCCCTACCCCTTGGCTCGTCATCCGGCCGGAAGCATCACCTATGGTGGGCATGACTTGTTGCAG
AGCGACGAAAAGCACATGCGTCGCATCCGTGGCAACCGCATCGCCATGGTGTTCCAGGAGCCGATGACCTCGCTCAACCC
GCTGCATACCGTCGGCATGCAGATCAACGAGGTCCTGCAGTTGCACAAGGGGCTGCGTGGCCGGGCCGCCACCGCACGCA
CGCTGGAACTGCTGGAACTGGTGGGCATACCCGAGCCTCGCAAGCGCATCCGCGCCTATCCTCATGAATTGTCTGGCGGT
CAGCGCCAGCGGGTGATGATCGCCATGGCGCTGGCCAACGAACCCGAGCTGCTGATCGCCGACGAGCCCACCACGGCGCT
CGACGTGACGGTGCAGCTGAAAATCCTCGAACTGCTCAAGGAATTGCAGCAGCGCCTGGGCATGGCGTTGCTGCTGATCA
GTCACGATCTGAACCTGGTCAGACGCATCGCGCATCGCGTATGTGTCATGCAGCGCGGTCGTGTCGTCGAACAGGCATCC
TGCGAACAACTGTTTCGTGCGCCGGAGCATCCCTATACTCAGGAACTGCTCGGCGCCGAACCCAGCGGAGGTCCGGTGCC
GGTCGAGGCCGCCCCGCCATTGCTGGAAGTGAAAGACCTGCGTGTCTGGTTTCCGATCAAGAAAGGCGTGCTCAGGCGCA
CCGTCGATCACATCAAGGCAGTGGATGGCGTCGACTTCAGCCTGCCCAAGGGACAGACGCTGGGTATCGTGGGTGAAAGC
GGTTCGGGCAAGTCGACATTGGGGCTGGCCATCCTGCGGTTGTTGTCCAGCCGCGGAGAGATCCGCTTCCAGGGACAAGC
GCTGGAGGATTTGTCGCAGCGAAGGATCCGGCCGTTGCGTCGACAGATGCAGGTGGTGTTTCAGGACCCCTACGGTAGCC
TGAGTCCACGCATGTCGGTGGGCCAGATCATCGGTGAAGGACTGGACATCCACCGGATGGGCAGCCCAGAGGAACGAGCG
CAGGCAATCATCGATGCGCTGATGGAGGTGGGATTGGATCCCGAGAGCCGCCACCGCTACCCCCACGAGTTTTCCGGTGG
GCAGCGGCAGCGCATAGCCATCGCGAGGGCGCTGGTACTCAAGCCGGATCTGATCCTGCTGGACGAACCGACCTCCGCGC
TGGACAGAACCGTGCAACGGCAGGTCGTCGAGCTACTCCGCTCGCTGCAGGCCAAGTACAACCTGACCTACCTGTTCATC
AGCCACGACCTGGCTGTGGTACGGGCGTTGAGTCACCAGATGATGGTGGTCAAGCAGGGAAAGGTAGTGGAACAGGGTGC
GGCCGAGGCCATCTTCGCCGCCCCGCAACATCCGTATACACAGCAGTTGCTGGAGTCCGCCTTTCTGGCGCCGGCACCTG
AACAACCAGAAGAGGGACAAGCACATGGGTTTTCTTACCGGTAA

Protein sequence :
MADNLIEVRNLAVEFVSGEQTQRVVEGVSFDIRKGETLALVGESGSGKSVTAHSILRLLPYPLARHPAGSITYGGHDLLQ
SDEKHMRRIRGNRIAMVFQEPMTSLNPLHTVGMQINEVLQLHKGLRGRAATARTLELLELVGIPEPRKRIRAYPHELSGG
QRQRVMIAMALANEPELLIADEPTTALDVTVQLKILELLKELQQRLGMALLLISHDLNLVRRIAHRVCVMQRGRVVEQAS
CEQLFRAPEHPYTQELLGAEPSGGPVPVEAAPPLLEVKDLRVWFPIKKGVLRRTVDHIKAVDGVDFSLPKGQTLGIVGES
GSGKSTLGLAILRLLSSRGEIRFQGQALEDLSQRRIRPLRRQMQVVFQDPYGSLSPRMSVGQIIGEGLDIHRMGSPEERA
QAIIDALMEVGLDPESRHRYPHEFSGGQRQRIAIARALVLKPDLILLDEPTSALDRTVQRQVVELLRSLQAKYNLTYLFI
SHDLAVVRALSHQMMVVKQGKVVEQGAAEAIFAAPQHPYTQQLLESAFLAPAPEQPEEGQAHGFSYR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 1e-95 43
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 9e-79 42
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 9e-79 42
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 9e-79 42
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 9e-79 42