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Name : PSJM300_10205 (PSJM300_10205) Accession : YP_006524465.1 Strain : Pseudomonas stutzeri DSM 10701 Genome accession: NC_018177 Putative virulence/resistance : Virulence Product : Orn/Arg/Lys decarboxylase Function : - COG functional category : - COG ID : - EC number : - Position : 2226756 - 2229008 bp Length : 2253 bp Strand : - Note : COG1982 Arginine/lysine/ornithine decarboxylases DNA sequence : ATGTACAAAGACTTGAAATTCCCCATCCTTATCGTTCACCGCGACATCAAGGCCGATACCGTCGCCGGCCAGCGCGTGCG CGAAATCGCCGCCGAACTGGAGCAGGACGGTTTCCATATCCTGCCTACGGCGAGCGCCAGCGAAGGGCGCATCGTCGCGT CCACTCACCATGGCCTCGCTTGCATTCTCGTTGCGGCCGAAGGGGCGGGTGACAACCAGCGCCTGCTGCAGGATGTTGTG GGATTGATTCGCGTGGCCCGGCGCCGTGCGCCGCAACTGCCGATCTTCGCGCTCGGCGAGCAGGTCACCATCGAGAACGC GCCGGCCGAAGCCATGGCCGATCTCAACGAACTGCGCGGCATCCTCTATCTGTTCGAAGATACCGTGCCCTTTCTGGCGC GGCAGGTGGCCCGGGCGGCGCGATCTTACCTGGAGGGCCTGCTGCCGCCTTTTTTTCGGGCGCTGGTCCAGCATACCGGC GACTCCAACTATTCCTGGCATACGCCCGGTCACGGCGGTGGCGTGGCCTTTCGCAAGAGCCCGGTGGGGCAGGCGTTCCA CCAGTTCTTCGGCGAGAACACCCTGCGTTCCGACCTCTCGGTCTCGGTGCCGGAGCTGGGGTCGCTGCTCGATCACACCG GACCGCTGGCGGCCGCCGAGGCCCGGGCGGCACGCAACTTCGGTGCAGACCACACGTTCTTCGTGATCAACGGCACCTCG ACGGCGAACAAGATCGTCTGGCATTCCATGGTGGCCAGGGGCGATCTGGTGCTGGTGGATCGCAACTGTCACAAGTCGAT CCTGCACTCGATCATCATGACCGGTGCGATCCCGCTCTATCTCACCCCGTCGCGCAACGAGCTGGGCATCATCGGGCCAA TTCCGCTGGAGGAGTTCAGCCGCGAGTCGATCCAGGCCAAGATCGATGCCAACCCGCTGACCCGTGGCCGACCCGCCAGG GTCAAACTGGTGGTGATCACCAACTCGACCTACGACGGCCTCTGTTACAACGCCAATCTGATCAAGCGCACGCTGAGCGA CAGTGTGGAGGTGCTGCATTTCGACGAGGCCTGGTACGCCTATGCGGCATTCCACGAGTTCTACGACGGTCGCTATGGCA TGGACACGCGCGAGCAGGGGCCGCTGGTGTTCACCACGCATTCGACGCACAAGGTGTTGGCCGCCTTCAGTCAGGCATCG ATGATCCATGTGCTCGACAGCCAGACCCGTCAGCTGGATCGCGATCGCTTCAACGAAGCCTTCATGATGCATATCTCCAC TTCGCCGCAGTACGGCATCCTTGCCTCGCTGGATGTGGCGTCCGCGATGATGGAAGGGCCCGCGGGCCGCTCGCTGATCC AGGAAACCTTCGACGAAGCGCTGAGCTTTCGCAGGGCCCTCAACAATCTGCGCCAGCACCTGGCGACGGATGACTGGTGG TTCAGTATCTGGCAGCCCACATTTGCAGAGGACCCGGAAGCGCTGGTCACCCGTGACTGGCTGCTCGAGCCGGACGCCGA CTGGCACGGTTTCGGCCATCTGGCCGAGGACTACGTACTGCTCGATCCGATCAAGGTCACGCTGGTGACCCCGGGCCTGA CAGCTGCCGGCAGGCTGAGCGAGCGTGGCATTCCCGCCGCGGTGGTCAGCAAGTTCCTCTGGGAACGCGGGCTGGTGGTG GAGAAGACCGGTCTCTACTCGATTCTGGTGCTCTTCTCCATGGGCATCACCAAGGGCAAGTGGAGCACCTTGCTCACCGA GCTGCTGGAGTTCAAGCGGCATTACGACAACAACGTCTCGCTGTGCGATGCGCTACCGGCGGTAGCCAGCGCGGGCGGCA GCGCATACGAGGGCATGGGGCTGCGCGATCTCTGCGACGCGCTGCATGCCTGTTACCGCGAAAACGCCACTGCCAAGGCG ATGCGGCGCATGTATACCGCCTTGCCCGAACTGGCGATGAAACCGGCGGATGCCTACGACAAGCTGGTGCGTGGCGAGGT GGAGGCGGTGCCTATCGAGCAGCTGGAAGGGCGTATCGCGGCCGTGATGCTGGTGCCATATCCGCCGGGAATTCCATTGA TCATGCCGGGCGAGCGATTCACCTCCCAGACGCGCTCGATTGTCGATTACCTTGAGTTCGCGCAGAACTTCGCCAAGCGC TTTCCGGGGTTCGATGCCGACGTGCATGGGCTGCAGAGCGAGGCCGATTCCAACGGGCCGCGCTATACGGTCGATTGCAT CCTGGGCGGTTGA Protein sequence : MYKDLKFPILIVHRDIKADTVAGQRVREIAAELEQDGFHILPTASASEGRIVASTHHGLACILVAAEGAGDNQRLLQDVV GLIRVARRRAPQLPIFALGEQVTIENAPAEAMADLNELRGILYLFEDTVPFLARQVARAARSYLEGLLPPFFRALVQHTG DSNYSWHTPGHGGGVAFRKSPVGQAFHQFFGENTLRSDLSVSVPELGSLLDHTGPLAAAEARAARNFGADHTFFVINGTS TANKIVWHSMVARGDLVLVDRNCHKSILHSIIMTGAIPLYLTPSRNELGIIGPIPLEEFSRESIQAKIDANPLTRGRPAR VKLVVITNSTYDGLCYNANLIKRTLSDSVEVLHFDEAWYAYAAFHEFYDGRYGMDTREQGPLVFTTHSTHKVLAAFSQAS MIHVLDSQTRQLDRDRFNEAFMMHISTSPQYGILASLDVASAMMEGPAGRSLIQETFDEALSFRRALNNLRQHLATDDWW FSIWQPTFAEDPEALVTRDWLLEPDADWHGFGHLAEDYVLLDPIKVTLVTPGLTAAGRLSERGIPAAVVSKFLWERGLVV EKTGLYSILVLFSMGITKGKWSTLLTELLEFKRHYDNNVSLCDALPAVASAGGSAYEGMGLRDLCDALHACYRENATAKA MRRMYTALPELAMKPADAYDKLVRGEVEAVPIEQLEGRIAAVMLVPYPPGIPLIMPGERFTSQTRSIVDYLEFAQNFAKR FPGFDADVHGLQSEADSNGPRYTVDCILGG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 2e-128 | 43 |
| unnamed | CAD66195.1 | putative cadaverin decarboxylase | Virulence | PAI III 536 | Protein | 7e-131 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PSJM300_10205 | YP_006524465.1 | Orn/Arg/Lys decarboxylase | VFG1670 | Protein | 4e-131 | 41 |
