Gene Information

Name : PSJM300_09830 (PSJM300_09830)
Accession : YP_006524390.1
Strain : Pseudomonas stutzeri DSM 10701
Genome accession: NC_018177
Putative virulence/resistance : Virulence
Product : Fe3+siderophore ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2134418 - 2135269 bp
Length : 852 bp
Strand : +
Note : COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components

DNA sequence : 
ATGACTGCCTTGCACGCTCGGAATCTGCATTTTGCCTACCAGGACAAGGTCATCCTGCGGGATATCTCCTTCTCGCTGCC
CAAGGGCCGGCTGATCGGCATCGTCGGCCCCAACGGCAGCGGCAAGTCCACGCTGCTCAAGCTGCTGGCGCGCCAACTCC
CGCTGCAAGGCGGAGAGGTGGACATCCAAGGACAGTCGCTGTCGAGCTATTCGATGAAGAGCCTGGCCCGACAACTGGCC
TTTCTACCCCAGCGTCCAGTAATGGTCGAAGGCATTCGTGTCGAACAACTGGTGCAATACGGGCGACATCCGCATCAGGG
CTGGTTCAACCAGTGGAGCGACGAAGACGCGCGGCAGGTGGCCCGCGCGCGGGAGGCCATGCAGCTCGATGCCATCTGGC
GGCGCCAGGCTTCATCGCTCTCCGGCGGCCAGGCGCAGCGTGCGTGGCTGGGCATGATCCTGGCGCAGAACACCGACCTG
ATCCTGCTCGACGAGCCCACCAGCGCGTTGGATATCGGCCACCAGGCCGAGGTGATGGAGGCCGTGCACCGGATCACCCA
GGAAGGCCGCACGGTGCTCATCGTCATCCATGACCTGGGTATCGCGGCGCGTTATTGCGACGAGCTGATCGCCCTCGCCG
ATGGCCAGATTCAGGCCATGGGGCCGGCACGCCAGGTCATGACCAAACAGCTGGTGGATCGCCTCTACGACACCGACGTG
GACATCCTGCCTGCGCCCGGTGACGGCGCGCCGGTGATCGTTCCAAGGCGCCGGTCGCTGGCGACTGCCACGTCGACCAA
TACCCGCACCGCACAGGTGCCCGAATTCGTTCAAGAGGATGCAACGCAATGA

Protein sequence : 
MTALHARNLHFAYQDKVILRDISFSLPKGRLIGIVGPNGSGKSTLLKLLARQLPLQGGEVDIQGQSLSSYSMKSLARQLA
FLPQRPVMVEGIRVEQLVQYGRHPHQGWFNQWSDEDARQVARAREAMQLDAIWRRQASSLSGGQAQRAWLGMILAQNTDL
ILLDEPTSALDIGHQAEVMEAVHRITQEGRTVLIVIHDLGIAARYCDELIALADGQIQAMGPARQVMTKQLVDRLYDTDV
DILPAPGDGAPVIVPRRRSLATATSTNTRTAQVPEFVQEDATQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 3e-44 42
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-45 42
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 5e-41 42
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 5e-41 42
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 5e-41 42
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 5e-41 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSJM300_09830 YP_006524390.1 Fe3+siderophore ABC transporter ATP-binding protein BAC0164 Protein 2e-44 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSJM300_09830 YP_006524390.1 Fe3+siderophore ABC transporter ATP-binding protein VFG1042 Protein 2e-44 42