|
Name : PSJM300_09355 (PSJM300_09355) Accession : YP_006524295.1 Strain : Pseudomonas stutzeri DSM 10701 Genome accession: NC_018177 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 2013627 - 2014904 bp Length : 1278 bp Strand : + Note : COG1593 TRAP-type C4-dicarboxylate transport system, large permease component DNA sequence : ATGACCGTCGTCGTCTTCCTGTCTTCTCTGTTTGGCTTCATGGCGTTCGGCATGCCGATCGCCTTTGCGCTGATCCTCAC CGGCGCGGTGCTGATGTGGTACCTGGATTTCTGGGATGTGCAGTTGCTGGCTCAGAACCTCCAGGCCGGCGCCGACAGCT TCCCGCTGCTGGCCGTGCCGTTCTTCATTCTTGCCGGTGAGCTGATGAACGCAGGCGGCATTTCCCGCCGCATCATCAAC ATGGCGCAGGCCTATTTCGGCCACAAGCGCGGCGGGCTCGGGTATGTCGCGATCGCCGCCTCGGTGTTGCTGGCGAGCAT GTCCGGTTCGGCGCTGGCGGACACTGCCGCGCTGGCCACGCTGTTGCTGCCGATGATGCGCGAGCGTGGCTATCCGCTGA GTTCGTCGTCCGGCCTGGTGGCGGCAGGCGGCATCATCGCGCCGATCATTCCGCCCTCGATGCCCTTCGTCATCTATGGC GTGGTGACCAATACATCGATCAGCCAGCTGTTCCTTGCGGGAATGGTGCCCGGGCTGATCATGGGCGTCGGGCTGGTGAT CGCCTGGACGATGATCGCGCGAAACATCGACGAGCCTCGGCAGGAAAAGGCCACCGGCGCCGAGCGGCGCAAGGCCCTGG TGGATGGCGCGGCGGCGCTGATGCTGCCGGTGATCATCGTCGGCGGGCTGCGCGGCGGGCTGTTCACCCCGACCGAGGCG GCCGTGGTGGCGGCGGTCTATGCGCTGGCCGTCTCGACGCTGCTCTATCGCGAGCTCAACTGGCGTGGCCTGGTCGAAGT CCTGACCCAAGCCAGCCGCACCACCGCATCGGTGATGTTCCTCTGTGCCGCCGCCATCGTGTCGGCCTACATGATCACCC TGGCGCAACTGCCGGGCGAAATCGCCGCGATGCTCGGGCCACTGGCGGAAAATCCCCGGCTGCTGATGGTTGCAATCATG CTGCTGATGATCGCGGTCGGCATGGTGCTCGACCTGACGCCGACCATCCTCATTCTGGGCCCGGTACTGGCGCCGATCGC CATCAAGGCAGGCATCGATCCGGTGTACTTCGGTGTGATGTTCGTGCTGATCGGCTCGGTCGGGTTGATTACTCCTCCGG TCGGCACGGTGCTCAACGTCGTGGGCGGGATAGGCAGGTTGCGCATGGAAGTCCTGGTGCGCGGGGTGATGCCGTTCCTG CTGATCTATCTGGTCATCGTCGCGTTGCTGATCGCGTTCCCCTCCATCGTCACCGTGCCGTTGGCATGGCTGCGCTGA Protein sequence : MTVVVFLSSLFGFMAFGMPIAFALILTGAVLMWYLDFWDVQLLAQNLQAGADSFPLLAVPFFILAGELMNAGGISRRIIN MAQAYFGHKRGGLGYVAIAASVLLASMSGSALADTAALATLLLPMMRERGYPLSSSSGLVAAGGIIAPIIPPSMPFVIYG VVTNTSISQLFLAGMVPGLIMGVGLVIAWTMIARNIDEPRQEKATGAERRKALVDGAAALMLPVIIVGGLRGGLFTPTEA AVVAAVYALAVSTLLYRELNWRGLVEVLTQASRTTASVMFLCAAAIVSAYMITLAQLPGEIAAMLGPLAENPRLLMVAIM LLMIAVGMVLDLTPTILILGPVLAPIAIKAGIDPVYFGVMFVLIGSVGLITPPVGTVLNVVGGIGRLRMEVLVRGVMPFL LIYLVIVALLIAFPSIVTVPLAWLR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC1777 | NP_231412.1 | hypothetical protein | Not tested | VPI-2 | Protein | 1e-39 | 42 |
| VC0395_A1375 | YP_001217318.1 | hypothetical protein | Not tested | VPI-2 | Protein | 1e-39 | 42 |
| VPI2_0025c | ACA01842.1 | TRAP dicarboxylate transporter DctM subunit | Not tested | VPI-2 | Protein | 8e-40 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PSJM300_09355 | YP_006524295.1 | hypothetical protein | VFG1110 | Protein | 4e-40 | 42 |
